Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
candidate regulatory elements
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
25
kidney
22
stomach
21
heart
17
brain
17
lung
17
muscle of arm
15
epithelial cell of proximal tubule
15
large intestine
15
muscle of back
15
placenta
14
adrenal gland
14
common myeloid progenitor, CD34-positive
14
muscle of leg
14
small intestine
13
glomerular endothelial cell
13
left lung
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
renal cortex interstitium
11
right lung
11
thymus
10
renal pelvis
10
right kidney
10
spleen
9
foreskin fibroblast
9
foreskin keratinocyte
9
induced pluripotent stem cell
9
islet of Langerhans
9
left kidney
9
liver
9
mammary epithelial cell
8
CD4-positive, alpha-beta T cell
8
T-cell acute lymphoblastic leukemia
8
neuroblastoma cell line
8
neuronal stem cell
7
B cell
7
CD8-positive, alpha-beta T cell
7
endothelial cell
7
heart left ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
osteoblast
7
spinal cord
6
hepatocyte
6
kidney interstitial cell
6
natural killer cell
6
peripheral blood mononuclear cell
6
prostate gland
6
subcutaneous adipose tissue
6
testis
6
upper lobe of left lung
5
CD4-positive, alpha-beta memory T cell
5
adipocyte
5
adipose tissue
5
bronchial epithelial cell
5
cardiac muscle cell
5
endothelial cell of umbilical vein
5
foreskin melanocyte
5
glomerular visceral epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
layer of hippocampus
5
pancreas
5
retina
5
sigmoid colon
5
skeletal muscle tissue
5
subcutaneous abdominal adipose tissue
5
trophoblast cell
4
CD14-positive monocyte
4
Peyer's patch
4
T-cell
4
Th1 cell
4
body of pancreas
4
bone tissue
4
chorionic villus
4
colon adenocarcinoma
4
dermis blood vessel endothelial cell
4
erythroid progenitor cell
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastroesophageal sphincter
4
keratinocyte
4
left renal cortex interstitium
4
left renal pelvis
4
lower leg skin
4
mesangial cell
4
mesenchymal stem cell
4
mesodermal cell
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
nephron progenitor
4
neurosphere
4
ovary
4
regulatory T cell
4
rhabdomyosarcoma cell
4
right renal pelvis
4
skeletal muscle myoblast
4
substantia nigra
4
temporal lobe
4
thyroid gland
4
tracheal epithelial cell
4
transverse colon
3
CD1c-positive myeloid dendritic cell
3
S-shaped body
3
T-helper 1 cell
3
adult endothelial progenitor cell
3
ascending aorta
3
breast epithelium
3
cardiac fibroblast
3
cardiac precursors (cardiac muscle cell)
3
caudate nucleus
3
colonic mucosa
3
dermis microvascular lymphatic vessel endothelial cell
3
endocrine pancreas
3
esophageal adenocarcinoma
3
esophagus muscularis mucosa
3
fibroblast of lung
3
fibroblast of mammary gland
3
fibroblast of pulmonary artery
3
fibroblast of villous mesenchyme
3
heart right ventricle
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
mammary gland epithelial cell
3
mesendoderm
3
meso-epithelial cell
3
monocyte
3
mononuclear cell of bone marrow
3
myotube
3
neural progenitor cell
3
omental fat pad
3
pancreatic ductal adenocarcinoma
3
pancreatic ductal cell
3
parathyroid adenoma
3
plasma cell
3
pre-B acute lymphoblastic leukemia cell
3
preadipocyte
3
psoas muscle
3
pulmonary artery endothelial cell
3
retinal pigment epithelial cell
3
right renal cortex interstitium
3
suprapubic skin
3
tibial nerve
3
trophoblast
2
Adipose stromal cell
2
BICR 31
2
CD34-positive, CD38-negative hematopoietic stem cell
2
CD8-Positive T-Lymphocytes
2
EAhy 926 cell
2
Ishikawa
2
Kupffer cell
2
Rhabdoid Tumor of the Kidney
2
T-helper 17 cell
2
T-helper 2 cell
2
T-lymphoma cell line
2
Th17 cell
2
acute myeloid leukemia cell
2
adipose-derived stem cell
2
angular gyrus
2
aorta
2
aortic adventitial fibroblast
2
astrocyte
2
atypical teratoid rhabdoid tumor
2
breast carcinoma
2
cardiac muscle myoblast
2
cardiac myoblast
2
cardiomyocytes (cardiac muscle cell)
2
cardiovascular progenitor cell
2
cerebellum
2
chorion
2
chronic lymphocytic leukemia cell
2
chronic myelomonocytic leukemia
2
cingulate gyrus
2
colorectal adenocarcinoma
2
colorectal cancer
2
columnar chondrocyte
2
cortex of kidney
2
diffuse intrinsic pontine glioma
2
diffuse large B-cell lymphoma
2
duodenal mucosa
2
embryonic stem cell
2
endodermal cell
2
endometrial stromal cell
2
endometrial stromal tumor
2
endometriosis
2
endometrium cancer
2
epidermal stem cell
2
epithelial cell of prostate
2
erythroid cell
2
esophagus
2
eye
2
fibroblast
2
fibroblast of breast
2
first pancreatic bud
2
gamma-delta T cell
Life stage
1
embryonic
Date released
3
February, 2021
2
September, 2022
1
June, 2020
1
March, 2020
1
May, 2021
Software used
2
macs
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
bed bed9
biosample_type!
cell line
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR832JXZ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesendoderm
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR042QDJ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827VVM
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP