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Citing CMDGA
Clear Filters
Annotation type
13
eQTL
11
gene expression
6
accessible chromatin
2
Fine-mapped variants
2
binding sites
2
chromatin state
2
sQTL
2
variant to gene
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
3
bed bed3+
bigBed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
5
left cardiac atrium
2
islet of Langerhans
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
layer of hippocampus
1
liver
1
mid-frontal lobe
1
mucosa of rectum
1
rectum smooth muscle tissue
1
skeletal muscle
1
stomach smooth muscle
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
Organ
2
pancreas
Date released
1
April, 2019
1
August, 2017
Software used
2
chromhmm
Lab
1
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
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bed bed9
bigBed bed9
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FileSet
TSTSR037617
released
Annotation file set
: Chromatin States from Gaulton lab at UCSD for islet
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
TSTSR679993
released
Annotation file set
: ChromHMM 13-state model for Islets
Lab:
Stephen Parker, UMich
Project:
AMP