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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
0
tissue
Biosample term
69
heart
67
stomach
65
kidney
55
brain
52
lung
51
muscle of arm
48
adrenal gland
48
small intestine
46
placenta
44
islet of Langerhans
43
large intestine
43
muscle of leg
42
liver
42
neural progenitor cell
41
muscle of back
39
left lung
37
retina
37
thymus
34
right lung
33
hematopoietic multipotent progenitor cell
32
right kidney
31
renal cortex interstitium
31
renal pelvis
28
spleen
27
left kidney
26
adipose tissue
26
heart left ventricle
24
spinal cord
21
adipocyte
21
subcutaneous adipose tissue
21
tibial nerve
20
body of pancreas
20
pancreas
20
pigmented layer of retina
19
caudate nucleus
18
coronary artery
18
sigmoid colon
17
ovary
17
right atrium auricular region
16
omental fat pad
16
psoas muscle
16
substantia nigra
16
tibial artery
15
testis
15
thyroid gland
15
transverse colon
14
cerebellum
14
frontal cortex
14
gastrocnemius medialis
14
heart right ventricle
14
putamen
13
ascending aorta
13
layer of hippocampus
13
muscle of trunk
13
skeletal muscle tissue
13
upper lobe of left lung
12
chorionic villus
12
prostate gland
11
Ammon's horn
11
Peyer's patch
11
cardiomyocytes
11
endocrine pancreas
11
left cardiac atrium
10
left renal cortex interstitium
10
left renal pelvis
10
right renal pelvis
10
temporal lobe
9
aorta
9
breast epithelium
9
embryonic stem cell
9
esophagus muscularis mucosa
9
esophagus squamous epithelium
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
mesenchymal stem cell
9
progenitor cell of endocrine pancreas
9
right renal cortex interstitium
9
trophoblast
8
T-cell acute lymphoblastic leukemia
8
cardiomyocytes (cardiac muscle cell)
8
colonic mucosa
8
esophagus
8
lower leg skin
8
neuroblastoma cell line
8
neuronal stem cell
8
right lobe of liver
8
thoracic aorta
8
uterus
8
vagina
7
amygdala
7
chorion membrane
7
cingulate gyrus
7
duodenal mucosa
7
eye
7
globus pallidus
7
hypothalamus
7
mesendoderm
7
midbrain
7
mucosa of rectum
7
nucleus accumbens
7
occipital lobe
7
parathyroid adenoma
7
stomach smooth muscle
7
tongue
6
angular gyrus
6
anterior cingulate cortex
6
cardiac muscle cell
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
dendritic cell
6
endodermal cell
6
gastroesophageal sphincter
6
limb
6
mesodermal cell
6
muscle layer of colon
6
muscle layer of duodenum
6
retinal pigment epithelial cell
6
subcutaneous abdominal adipose tissue
6
superior temporal gyrus
6
urinary bladder
5
C1 segment of cervical spinal cord
5
SGBS preadipocytes
5
bipolar neuron
5
cartilage tissue
5
chondrocyte
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
medulla oblongata
5
middle frontal gyrus
5
pancreatic ductal cell
5
pons
5
right cardiac atrium
5
skin of body
5
umbilical cord
4
B cell
4
Brodmann (1909) area 46
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
adipose-derived stem cell
4
bone tissue
4
cerebellar cortex
4
colon adenocarcinoma
4
cortex of kidney
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
muscle cell
4
neural cell
4
rhabdomyosarcoma cell
4
smooth muscle cell
4
trophoblast cell
4
visceral abdominal adipose tissue
3
amnion
3
dorsolateral prefrontal cortex
3
ectodermal cell
3
embryonic facial prominence
3
esophageal adenocarcinoma
3
femur
3
foreskin keratinocyte
3
foreskin melanocyte
3
germinal matrix
3
hepatocyte
3
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
3
inferior parietal cortex
3
islet precursor cell
3
mammary gland epithelial cell
3
mucosa of stomach
3
neuron
3
olfactory neurosphere cell line
3
pancreatic ductal adenocarcinoma
3
prefrontal cortex
3
rectum smooth muscle tissue
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
BICR 31
2
CD4-positive helper T cell
2
CD8-Positive T-Lymphocytes
2
EAhy 926 cell
2
T-lymphoma cell line
2
Th1 cell
2
arm bone
2
atypical teratoid rhabdoid tumor
2
blood
2
breast carcinoma
2
cardiac mesoderm primordium
2
cardiac myoblast
2
cardiovascular progenitor cell
2
chorion
2
chronic myelomonocytic leukemia
2
colorectal adenocarcinoma
2
dermis microvascular lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
diffuse intrinsic pontine glioma
2
diffuse large B-cell lymphoma
2
endometrial stromal cell
2
endometrial stromal tumor
2
endometriosis
2
endometrium cancer
2
endothelial cell
2
epidermal stem cell
2
erythroid progenitor cell
Organ
2
epithelium
2
lymphatic vessel
2
skin of body
2
vasculature
Date released
1
February, 2021
1
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
bed bed9
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR557WEE
released
Annotation file set
: Binding sites annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR841NUD
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP