Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
131
monocyte
69
heart
67
stomach
65
kidney
61
HeLa-S3
55
brain
53
H1-hESC
52
lung
51
CD8-positive, alpha-beta T cell
51
muscle of arm
48
adrenal gland
48
small intestine
47
neural progenitor cell
46
placenta
45
islet of Langerhans
44
A549
43
large intestine
43
muscle of leg
42
liver
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
37
retina
37
thymus
36
B cell
35
K562
34
right lung
33
hematopoietic multipotent progenitor cell
32
fibroblast
32
macrophage
32
right kidney
31
renal cortex interstitium
31
renal pelvis
28
spinal cord
28
spleen
27
CD14-positive monocyte
27
left kidney
26
heart left ventricle
25
adipose tissue
25
regulatory T cell
24
adipocyte
24
smooth muscle cell
23
CD4-positive, alpha-beta memory T cell
21
MCF-7
21
pericyte cell
21
subcutaneous adipose tissue
21
tibial nerve
20
body of pancreas
20
breast cancer cell
20
natural killer cell
19
T-helper 1 cell
19
caudate nucleus
19
pancreas
18
HFFc6
18
T cell
18
T-helper 17 cell
17
coronary artery
17
foreskin fibroblast
17
ovary
17
right atrium auricular region
17
sigmoid colon
17
trophoblast cell
16
HepG2
16
astrocyte
16
cardiac muscle cell
16
induced pluripotent stem cell
16
osteoblast
16
substantia nigra
15
CD4-positive, alpha-beta T cell
15
CD8-positive, alpha-beta memory T cell
15
GM12878
15
H9
15
mesenchymal stem cell
15
omental fat pad
15
psoas muscle
15
transverse colon
14
gastrocnemius medialis
14
mononuclear cell
14
testis
14
thyroid gland
14
tibial artery
13
T-helper 2 cell
13
excitatory neuron
13
fibroblast of cardiac tissue
13
frontal cortex
13
heart right ventricle
13
layer of hippocampus
13
neutrophil
13
putamen
13
skeletal muscle myoblast
13
skeletal muscle tissue
13
upper lobe of left lung
12
ascending aorta
12
cerebellum
12
embryonic stem cell
12
fibroblast of lung
12
lymphoblastoid cell line
12
muscle of trunk
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
12
prostate gland
11
Ammon's horn
11
chorionic villus
11
erythroblast
10
Peyer's patch
10
Rhabdomyosarcoma
10
endocrine pancreas
10
gastric cancer cell
10
left renal cortex interstitium
10
neuronal stem cell
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal pelvis
10
skeletal muscle satellite cell
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
fibroblast of dermis
9
left cardiac atrium
9
left renal pelvis
9
liposarcoma
9
lymphocyte
9
neurosphere
9
skin fibroblast
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
aorta
8
esophagus
8
fibroblast cell line
8
hepatic stellate cell
8
pituitary stalk
8
skeletal muscle fiber
8
temporal lobe
8
trophoblast
7
CD4-positive helper T cell
7
GM06990
7
GM12864
7
GM12865
7
HAP-1
7
HT-29
7
IMR-90
7
Jurkat
7
amygdala
7
cardiomyocytes (cardiac muscle cell)
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
extended pluripotent stem (EPS) cells
7
lower leg skin
7
mature neutrophil
7
memory B cell
7
mesendoderm
7
thoracic aorta
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19240
6
HUES8
6
KARPAS-422 cell
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
cingulate gyrus
6
endometrium adenocarcinoma
6
eye
6
fibroblast of pulmonary artery
6
globus pallidus
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
immortal human breast epithelial cell line cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
nucleus accumbens
6
occipital lobe
6
parathyroid adenoma
6
plasma cell
6
right renal cortex interstitium
6
smooth muscle cell of the coronary artery
6
tongue
6
type I muscle cell
6
uterus
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
files.file_type!
bed bed9
organ_slims!
epithelium
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP