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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
4
candidate regulatory elements
2
chromatin state
2
target gene predictions
1
binding sites
1
gene expression
1
histone modifications
Annotation Category
2
Target gene links
1
Gene expression levels
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
1
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
54
HeLa-S3
46
H1-hESC
23
heart
22
K562
20
stomach
19
HFFc6
18
A549
18
lung
17
brain
16
adrenal gland
16
epithelial cell of proximal tubule
16
monocyte
16
muscle of arm
16
small intestine
14
glomerular endothelial cell
14
kidney
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
13
thymus
12
islet of Langerhans
12
neural progenitor cell
11
B cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right lung
10
T-helper 1 cell
10
adipose tissue
10
hepatocyte
10
liver
10
regulatory T cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
EndoC_BH1
9
T-helper 17 cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
left kidney
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
heart left ventricle
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
cardiomyocytes (cardiac muscle cell)
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphocyte
7
psoas muscle
7
spinal cord
6
T-helper 2 cell
6
body of pancreas
6
endothelial cell
6
glomerular visceral epithelial cell
6
heart right ventricle
6
kidney interstitial cell
6
mononuclear cell
6
olfactory receptor cell
6
ovary
6
sigmoid colon
5
MCF-7
5
aorta
5
cardiac precursors (cardiac muscle cell)
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
pancreatic ductal cell
5
tibial nerve
5
trophoblast cell
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
T cell
4
adult endothelial progenitor cell
4
bone tissue
4
caudate nucleus
4
cerebellum
4
chorionic villus
4
endocrine pancreas
4
foreskin keratinocyte
4
frontal cortex
4
gamma-delta T cell
4
gastrocnemius medialis
4
iPSC derived cell line
4
muscle of trunk
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
natural killer cell
4
nephron progenitor
4
omental fat pad
4
pancreas
4
retina
4
right atrium auricular region
4
skeletal muscle tissue
4
subcutaneous adipose tissue
4
testis
4
thyroid gland
4
transverse colon
3
Ammon's horn
3
CD8-positive, alpha-beta T cell
3
HCT116
3
Peyer's patch
3
S-shaped body
3
adipocyte
3
ascending aorta
3
central memory CD8-positive, alpha-beta T cell
3
chorion membrane
3
coronary artery
3
effector memory CD8-positive, alpha-beta T cell
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
esophagus
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
hepatocyte(AFP)
3
immortal human breast epithelial cell line cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
layer of hippocampus
3
mammary gland epithelial cell
3
memory B cell
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
neutrophil
3
osteoblast
3
right cardiac atrium
3
skeletal muscle myoblast
3
substantia nigra
3
temporal lobe
3
tibial artery
3
trophoblast
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Brodmann (1909) area 46
2
CD4-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
HepG2
2
Kupffer cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T follicular helper cell
2
T47D
2
angular gyrus
2
astrocyte
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
dorsolateral prefrontal cortex
2
duodenal mucosa
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
embryonic stem cell
2
endodermal cell
2
epithelial cell of prostate
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
hepatic stellate cell
2
keratinocyte
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
left cardiac atrium
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
lymphocyte of B lineage (iPSC)
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesendoderm
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
Organ
3
connective tissue
Life stage
2
adult
1
unknown
Date released
2
September, 2022
1
February, 2021
Software used
3
r
Lab
4
Jesse Engreitz, Stanford University
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
files.file_type!
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Showing 3 of 3 results
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Download
FileSet
DSR339QKV
released
Annotation file set
: Target gene predictions for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR356IFR
released
Annotation file set
: Gene expression annotation of adipocyte from abdominal and gluteo-femoral preadipocytes of GSE118500 for GSE118497
Lab:
AMP-T2D consortium
Project:
AMP