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Citing CMDGA
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Annotation type
7
accessible chromatin
7
binding sites
6
gene expression
1
caQTL
1
histone modifications
1
target gene predictions
Annotation Category
6
Gene expression levels
Annotation type Category
6
RNA-seq
Available data
5
tsv
4
bigWig
File set status
6
released
Genome assembly (visualization)
4
GRCh38
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
cell line
Biosample term
4
endothelial cell of hepatic sinusoid
3
Afferent / Efferent Arteriole Endothelial Cell
3
Degenerative Peritubular Capillary Endothelial Cell
3
Glomerular Capillary Endothelial Cell
3
Peritubular Capillary Endothelial Cell
2
smooth muscle cell of the coronary artery
1
aorta
1
ascending aorta
1
coronary artery
1
endothelial cell of coronary artery
1
pancreatic endothelial cell
1
tibial artery
1
whole blood
Organ
6
blood vessel
6
vasculature
4
epithelium
4
liver
2
artery
2
heart
Life stage
6
adult
Date released
4
February, 2024
1
February, 2020
1
February, 2021
Software used
4
salmon
2
r
Lab
4
Ines Cebola, Imperial College London
2
AMP-T2D consortium
Project
6
AMP
RFA
4
AMP2
2
AMP
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FileSet
DSR657AGH
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with 10nM insulin, 320µM palmitic acid and 320 µM oleic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR967TCE
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with 10nM insulin and 320µM palmitic acid.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR193THB
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with 10nM insulin.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR881TMR
released
Annotation file set
: Gene expression of liver sinusoidal endothelial cells cultured with basal medium.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR938TKW
released
Annotation file set
: Gene expression annotation of smooth muscle cell of the coronary artery for GSE113348
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR277QFW
released
Annotation file set
: Gene expression levels of Coronary artery smooth muscle cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP