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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
4
target gene predictions
3
differential activity
3
gene expression
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
5
bed bed3+
4
bigWig
1
bam
bed gappedPeak
1
bigBed narrowPeak
1
xls
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
8
EndoC_BH1
8
pancreatic ductal cell
7
islet of Langerhans
7
pancreatic acinar cell
7
pancreatic beta cell
6
pancreatic alpha cell
5
pancreas
4
pancreatic delta cell
4
pancreatic stellate cell
2
pancreatic polypeptide-secreting cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
type B pancreatic cell
Organ
4
epithelium
4
pancreas
Life stage
1
adult
Date released
2
January, 2021
1
February, 2024
1
November, 2021
Software used
4
macs
Lab
3
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Project
2
T1D
1
AMP
1
ENCODE
RFA
2
T1D
1
AMP
1
ENCODE3
files.file_type!
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Showing 4 of 4 results
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Download
FileSet
DSR181PDQ
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Delta,Gamma cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR821QOK
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of SSTlow_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR247PPG
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of SSThigh_delta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR119NFC
released
Annotation file set
: pancreatic delta cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP