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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
accessible chromatin
3
target gene predictions
2
binding sites
2
chromatin state
1
histone modifications
1
variant allelic effects
Annotation Category
3
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
2
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
4
bronchial epithelial cell
1
club cell
Organ
173
epithelium
151
musculature of body
150
kidney
149
lung
142
brain
132
intestine
124
connective tissue
112
embryo
95
limb
90
heart
84
bodily fluid
80
blood
80
large intestine
79
skin of body
69
extraembryonic component
62
uterus
59
pancreas
56
vasculature
54
stomach
45
blood vessel
43
small intestine
37
liver
35
adrenal gland
34
mammary gland
33
placenta
31
bone element
28
prostate gland
26
ureter
25
thymus
22
adipose tissue
21
penis
19
gonad
18
eye
17
esophagus
17
lymph node
17
spinal cord
14
artery
14
spleen
11
lymphoid tissue
11
ovary
10
pituitary gland
10
thyroid gland
8
mouth
8
testis
7
vein
6
nerve
6
skeleton
5
bone marrow
5
breast
5
bronchus
5
lymphatic vessel
5
urinary bladder
4
tongue
4
vagina
2
nose
Life stage
4
unknown
Date released
4
September, 2022
1
November, 2021
Software used
2
chromhmm
2
r
1
abc
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
1
ENCODE
RFA
4
AMP
1
ENCODE3
files.file_type!
bigBed bed9
Showing 5 of 5 results
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Download
FileSet
DSR458CQB
released
Annotation file set
: Target gene predictions for BSS00153 bronchial epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR960FTY
released
Annotation file set
: Target gene predictions for BSS00150 bronchial epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR702JKN
released
Annotation file set
: Chromatin states for BSS00153 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524OJC
released
Annotation file set
: Chromatin states for BSS00150 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR905LLL
released
Annotation file set
: Target gene predictions of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE