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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
target gene predictions
3
chromatin state
1
accessible chromatin
1
gene expression
1
variant allelic effects
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
5
bed bed9
bigBed bed9
File set status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
19
heart
19
stomach
18
A549
16
brain
16
lung
16
muscle of arm
15
small intestine
14
adrenal gland
14
kidney
14
placenta
13
large intestine
13
left lung
13
muscle of back
13
muscle of leg
11
right lung
11
thymus
10
common myeloid progenitor, CD34-positive
10
right kidney
9
hematopoietic multipotent progenitor cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
liver
7
K562
7
mature neutrophil
7
spinal cord
6
B cell
6
adipose tissue
6
left cardiac atrium
6
spleen
5
CD14-positive, CD16-negative classical monocyte
5
CD8-positive, alpha-beta memory T cell
5
MCF-7
5
adipocyte
5
heart left ventricle
5
mononuclear cell
5
sigmoid colon
5
trophoblast cell
4
alternatively activated macrophage
4
body of pancreas
4
caudate nucleus
4
chorionic villus
4
foreskin keratinocyte
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
thyroid gland
4
transverse colon
3
CD14-positive monocyte
3
CD4-positive, alpha-beta T cell
3
CD4-positive, alpha-beta memory T cell
3
HeLa-S3
3
Peyer's patch
3
T cell
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
endocrine pancreas
3
endometrium adenocarcinoma
3
endothelial cell of umbilical vein
3
heart right ventricle
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
mucosa of rectum
3
natural killer cell
3
neurosphere
3
retina
3
stomach smooth muscle
3
substantia nigra
3
temporal lobe
3
testis
3
tibial nerve
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
ESC derived cell line
2
GM12878
2
H1-hESC
2
HepG2
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T-helper 1 cell
2
T-helper 2 cell
2
T47D
2
angular gyrus
2
aorta
2
ascending aorta
2
breast epithelium
2
cerebellum
2
chorion membrane
2
coronary artery
2
dermis blood vessel endothelial cell
2
endodermal cell
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
fibroblast of cardiac tissue
2
fibroblast of lung
2
foreskin fibroblast
2
frontal cortex
2
islet of Langerhans
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mammary gland epithelial cell
2
mesenchymal stem cell
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
naive T cell
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
rectum smooth muscle tissue
2
regulatory T cell
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
skin fibroblast
2
thoracic aorta
2
tibial artery
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM08714
1
GM10248
1
GM10266
1
GM12875
1
GM18507
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GM23338
1
H4
1
H54
1
H7-hESC
1
H9
1
HAP-1
1
HCT116
1
HEK293
1
HEK293T
1
HL-60
1
HPDE6-E6E7
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HTR-8/Svneo
1
HUES48
Organ
3
heart
Life stage
1
adult
1
child
1
embryonic
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
bigBed bed9
relevant_life_stage!
unknown
Showing 3 of 3 results
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Download
FileSet
DSR847SDT
released
Annotation file set
: Chromatin states for BSS00525 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR483WIF
released
Annotation file set
: Chromatin states for BSS00524 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR044FMF
released
Annotation file set
: Chromatin states for BSS00523 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP