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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
54
common myeloid progenitor, CD34-positive
34
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
28
monocyte
25
endothelial cell
24
regulatory T cell
22
CD8-positive, alpha-beta memory T cell
22
epithelial cell of proximal tubule
21
T-helper 1 cell
20
glomerular endothelial cell
20
mononuclear cell
19
T-helper 17 cell
19
endothelial cell of umbilical vein
19
foreskin keratinocyte
17
T cell
17
hepatocyte
17
macrophage
17
natural killer cell
17
trophoblast cell
16
CD8-positive, alpha-beta T cell
16
fibroblast of lung
15
T-helper 2 cell
15
fibroblast
15
neutrophil
14
CD4-positive, alpha-beta T cell
14
foreskin fibroblast
14
skeletal muscle myoblast
13
keratinocyte
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
neurosphere
13
smooth muscle cell
12
fibroblast of dermis
12
mammary gland epithelial cell
12
osteoblast
12
pancreatic ductal cell
12
pericyte cell
11
bronchial epithelial cell
10
dermis blood vessel endothelial cell
10
endothelial cell of hepatic sinusoid
10
fibroblast of cardiac tissue
10
glomerular visceral epithelial cell
10
mammary epithelial cell
10
pancreatic acinar cell
10
pancreatic delta cell
9
epithelial cell of prostate
9
kidney tubule cell
9
naive T cell
9
pancreatic alpha cell
9
pancreatic beta cell
9
skeletal muscle satellite cell
8
astrocyte
8
fibroblast of breast
8
mature neutrophil
8
myoepithelial cell of mammary gland
8
skin fibroblast
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
kidney glomerular epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
renal cortical epithelial cell
7
retinal pigment epithelial cell
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
alternatively activated macrophage
6
cardiac muscle cell
6
choroid plexus epithelial cell
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of esophagus
6
erythroblast
6
foreskin melanocyte
6
glutamatergic neuron
6
hepatic stellate cell
6
kidney epithelial cell
6
kidney interstitial cell
6
mesenchymal stem cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
pancreatic stellate cell
6
pulmonary artery endothelial cell
6
skeletal muscle fiber
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
inflammatory macrophage
5
iris pigment epithelial cell
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
luminal epithelial cell of mammary gland
5
lung microvascular endothelial cell
5
memory B cell
5
mesangial cell
5
non-pigmented ciliary epithelial cell
5
peripheral blood mononuclear cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
5
type I muscle cell
5
type II muscle cell
4
adult endothelial progenitor cell
4
astrocyte of the spinal cord
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
gamma-delta T cell
4
kidney capillary endothelial cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mast cell
4
myofibroblast cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
stromal cell of bone marrow
4
vascular associated smooth muscle cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
T follicular helper cell
3
activated CD4-positive, alpha-beta T cell
3
adipocyte
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
aortic adventitial fibroblast
3
basal cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
effector memory CD8-positive, alpha-beta T cell
3
enterocyte
3
epidermal melanocyte
3
epithelial cell of amnion
3
gabaergic neuron
3
kidney cell
Life stage
1
adult
Date released
1
January, 2022
Software used
1
cicero
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP
files.file_type!
bigWig
annotation_type!
histone modifications
Showing 1 of 1 results
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Download
FileSet
DSR751QTO
released
Annotation file set
: Co-accessibility linking chromatin sites across human cell snATAC-seq
Lab:
Bing Ren, UCSD
Project:
AMP