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Schema
Citing CMDGA
Clear Filters
Annotation type
30
histone modifications
7
candidate regulatory elements
5
target gene predictions
3
gene expression
1
accessible chromatin
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
5
bed bed3+
bigWig
1
bed bed9+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
23
heart
22
stomach
19
A549
19
brain
16
kidney
16
lung
16
muscle of arm
16
muscle of leg
16
small intestine
15
adrenal gland
15
placenta
14
large intestine
14
neural progenitor cell
13
common myeloid progenitor, CD34-positive
13
left lung
13
muscle of back
12
right lung
12
thymus
11
embryonic stem cell
11
hematopoietic multipotent progenitor cell
11
liver
10
B cell
10
adipocyte
10
renal pelvis
10
retina
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
spinal cord
8
K562
8
heart left ventricle
7
CD8-positive, alpha-beta memory T cell
7
EndoC_BH1
7
adipose tissue
7
mature neutrophil
7
pigmented layer of retina
7
spleen
6
MCF-7
6
T cell
6
endothelial cell of umbilical vein
6
left cardiac atrium
6
mononuclear cell
6
retinal pigment epithelial cell
6
sigmoid colon
6
trophoblast cell
5
CD14-positive, CD16-negative classical monocyte
5
caudate nucleus
5
chondrocyte
5
fibroblast of cardiac tissue
5
foreskin keratinocyte
5
gastrocnemius medialis
5
heart right ventricle
5
islet of Langerhans
5
mesenchymal stem cell
5
ovary
5
pancreas
5
psoas muscle
5
regulatory T cell
5
temporal lobe
5
thyroid gland
5
tibial nerve
5
transverse colon
4
CD14-positive monocyte
4
Peyer's patch
4
SGBS preadipocytes
4
T-helper 1 cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
fibroblast of lung
4
glutamatergic neuron
4
layer of hippocampus
4
mammary gland epithelial cell
4
muscle of trunk
4
natural killer cell
4
skeletal muscle myoblast
4
skin fibroblast
4
testis
4
tibial artery
4
upper lobe of left lung
3
CD4-positive, alpha-beta T cell
3
GM12878
3
H1-hESC
3
HeLa-S3
3
HepG2
3
KARPAS-422 cell
3
NAMALWA cell
3
SK-N-DZ
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
breast epithelium
3
bronchial epithelial cell
3
cingulate gyrus
3
colonic mucosa
3
duodenal mucosa
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
fibroblast of dermis
3
foreskin fibroblast
3
frontal cortex
3
hepatocyte
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
keratinocyte
3
kidney tubule cell
3
limb
3
mucosa of rectum
3
naive T cell
3
neurosphere
3
osteoblast
3
prostate gland
3
right atrium auricular region
3
right cardiac atrium
3
skeletal muscle satellite cell
3
skeletal muscle tissue
3
smooth muscle cell
3
stomach smooth muscle
3
substantia nigra
3
thoracic aorta
3
tongue
3
trophoblast
3
urinary bladder
2
22Rv1
2
A172
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
Ammon's horn
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CD8-positive, alpha-beta T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
DG-75 cell
2
Daoy
2
ESC derived cell line
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM18507
2
GM19240
2
GM23248
2
H4
2
H7-hESC
2
HAP-1
2
HEK293
2
HL-60
2
HT-29
2
HUES6
2
HuH-7
2
IMR-90
2
KBM-7
2
L1-S8
2
L1-S8R
2
LHCN-M2
2
LNCaP clone FGC
2
LoVo cell
2
M059J
2
MG63
2
MM.1S
2
NCI-H226 cell
2
NT2-D1 cell
2
OCI-LY7
2
PC-3
2
PC-9
2
RCC 7860
2
RPMI7951
2
RPMI8226
2
RWPE1
2
Rh-4 cell
2
SJCRH30
2
SJSA1
2
SK-N-MC
2
SK-N-SH
2
SUDHL5
2
SW480
2
T47D
Life stage
1
child
Date released
1
June, 2020
1
May, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
bigWig
Showing 2 of 2 results
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Download
FileSet
DSR271DAI
released
Annotation file set
: Chromatin state of CD8-positive, alpha-beta T cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR589PDF
released
Annotation file set
: Accessible chromatin annotation for Blood CD8+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP