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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
primary cell
1
in vitro differentiated cells
Biosample term
87
heart
86
stomach
72
brain
71
kidney
68
lung
66
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
60
placenta
57
muscle of leg
56
large intestine
54
H1-hESC
54
muscle of back
52
left lung
50
neural progenitor cell
48
thymus
47
liver
45
right lung
43
hematopoietic multipotent progenitor cell
41
K562
41
right kidney
40
islet of Langerhans
39
renal cortex interstitium
39
renal pelvis
36
left kidney
35
spinal cord
32
spleen
31
heart left ventricle
30
adipose tissue
26
MCF-7
24
body of pancreas
24
retina
23
sigmoid colon
23
tibial nerve
22
EndoC_BH1
21
caudate nucleus
20
adipocyte
20
breast cancer cell
20
ovary
20
psoas muscle
19
HFFc6
18
gastrocnemius medialis
18
pancreas
18
subcutaneous adipose tissue
18
substantia nigra
18
thyroid gland
18
transverse colon
17
embryonic stem cell
17
heart right ventricle
17
muscle of trunk
17
right atrium auricular region
17
testis
16
GM12878
16
H9
16
HepG2
16
chorionic villus
16
coronary artery
16
induced pluripotent stem cell
16
layer of hippocampus
16
omental fat pad
16
skeletal muscle tissue
16
tibial artery
16
upper lobe of left lung
15
cerebellum
14
ascending aorta
14
endocrine pancreas
14
frontal cortex
14
prostate gland
13
Peyer's patch
13
aorta
13
putamen
13
temporal lobe
12
lymphoblastoid cell line
12
mesenchymal stem cell
12
neuroblastoma cell
11
Ammon's horn
11
breast epithelium
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
left cardiac atrium
10
left renal cortex interstitium
10
lymphocyte
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
trophoblast
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
cardiac muscle cell
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
left renal pelvis
9
liposarcoma
9
parathyroid adenoma
9
right renal pelvis
9
thoracic aorta
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
KARPAS-422 cell
8
MM.1S
8
NAMALWA cell
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
pituitary stalk
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
amygdala
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
neuronal stem cell
7
right lobe of liver
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LNCAP
6
OCI-LY7
6
PC-9
6
SJSA1
6
SW480
6
WI38
6
anterior cingulate cortex
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
globus pallidus
6
hESC cell
6
hypothalamus
6
iPSC derived cell line
6
mesodermal cell
6
mucosa of rectum
6
neuroblastoma cell line
6
nucleus accumbens
6
occipital lobe
6
pigmented layer of retina
6
urinary bladder
5
A172
5
A673
5
ACHN
5
C1 segment of cervical spinal cord
5
Caki2
5
CyT49
Date released
1
June, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
files.file_type!
bigWig
biosample_type!
primary cell
Showing 1 of 1 results
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Download
FileSet
DSR589PDF
released
Annotation file set
: Accessible chromatin annotation for Blood CD8+ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP