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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
2
eQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
5
RNA-seq
Available data
4
tsv
3
bed bed3+
bigWig
File set status
5
released
Genome assembly (visualization)
22
hg19
5
GRCh38
1
hg18
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
87
monocyte
54
HeLa-S3
38
H1-hESC
27
neural progenitor cell
22
K562
21
heart
20
brain
20
stomach
19
HFFc6
18
A549
17
lung
16
muscle of arm
16
small intestine
15
adrenal gland
15
kidney
15
muscle of leg
15
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
endothelial cell of hepatic sinusoid
10
hematopoietic multipotent progenitor cell
10
macrophage
10
pericyte cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
heart left ventricle
9
left kidney
9
renal cortex interstitium
9
renal pelvis
9
tibial nerve
8
B cell
8
body of pancreas
8
caudate nucleus
8
coronary artery
8
endothelial cell
8
fibroblast
8
liver
8
smooth muscle cell
8
spinal cord
8
substantia nigra
8
tibial artery
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
T cell
7
adipose tissue
7
ascending aorta
7
cerebellum
7
frontal cortex
7
lymphocyte
7
putamen
7
right atrium auricular region
7
spleen
6
hepatocyte
6
iPSC derived cell line
6
left cardiac atrium
6
lymphoblastoid cell line
6
mononuclear cell
6
olfactory receptor cell
6
omental fat pad
5
Ammon's horn
5
HepG2
5
MCF-7
5
amygdala
5
anterior cingulate cortex
5
heart right ventricle
5
hypothalamus
5
nucleus accumbens
5
ovary
5
regulatory T cell
5
right lobe of liver
5
sigmoid colon
5
subcutaneous adipose tissue
5
thyroid gland
5
transverse colon
5
trophoblast cell
4
C1 segment of cervical spinal cord
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
angular gyrus
4
aorta
4
cerebellum (Hemisphere)
4
chorionic villus
4
colon epithelial cell
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
fibroblast of cardiac tissue
4
foreskin keratinocyte
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
keratinocyte
4
layer of hippocampus
4
left ventricle myocardium
4
mammary gland epithelial cell
4
muscle of trunk
4
natural killer cell
4
psoas muscle
4
retina
4
skin of body
4
temporal lobe
4
testis
3
CD4-positive helper T cell
3
HCT116
3
Peyer's patch
3
astrocyte
3
blood cell
3
chorion membrane
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of dermis
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
islet of Langerhans
3
luminal epithelial cell of mammary gland
3
mesenchymal stem cell
3
naive T cell
3
neurosphere
3
neutrophil
3
pancreas
3
prostate gland
3
right cardiac atrium
3
skeletal muscle satellite cell
3
skeletal muscle tissue
3
skin fibroblast
3
thoracic aorta
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Brodmann (1909) area 46
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipocyte
2
blood vessel smooth muscle cell
2
breast epithelium
2
bronchial epithelial cell
2
cingulate gyrus
2
colonic mucosa
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
enteric smooth muscle cell
2
epithelial cell of prostate
2
esophagus squamous epithelium
2
eye
2
fat cell
2
fibroblast of breast
2
fibroblast of the aortic adventitia
2
foreskin fibroblast
2
gabaergic neuron
2
germinal matrix
2
glutamatergic neuron
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
microglial cell
2
mucosa of rectum
2
muscle
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
pancreatic A cell
2
parathyroid adenoma
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
smooth muscle cell of the esophagus
2
stomach smooth muscle
2
tongue
2
trophoblast
2
type B pancreatic cell
2
type II pneumocyte
2
urinary bladder
2
uterus
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
Organ
5
adipose tissue
5
connective tissue
Life stage
4
adult
Date released
3
March, 2020
1
February, 2020
1
January, 2022
Software used
1
gtex_eqtl:V8
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
bigWig
Showing 5 of 5 results
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Download
FileSet
DSR943WPJ
released
Annotation file set
: adipose subcutaneous eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329VXM
released
Annotation file set
: Fine-mapping results from DAPG of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR382TAD
released
Annotation file set
: Fine-mapping results from CAVIAR of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR337DSV
released
Annotation file set
: Fine-mapping results from CaVEMaN of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR655IYK
released
Annotation file set
: eQTL of subcutaneous adipose tissue for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP