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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
caQTL
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
11
ChIP-seq
8
DNase-seq
2
snATAC-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
RNA-seq
1
pCHi-C
1
snRNA-seq
Available data
3
bed bed3+
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
8
fibroblast
7
endothelial cell
6
macrophage
5
smooth muscle cell
4
skeletal muscle fiber
3
T cell
3
enterocyte
3
myofibroblast cell
3
pancreatic alpha cell
3
pancreatic beta cell
3
pancreatic delta cell
2
Schwann cell
2
adipocyte
2
basal cell
2
epithelial cell of esophagus
2
goblet cell
2
mesenchymal stem cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
type I muscle cell
2
type II muscle cell
2
vascular associated smooth muscle cell
1
CD8-positive, alpha-beta T cell
1
Satellite Cells, Skeletal Muscle
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
bronchial goblet cell
1
cardiac muscle cell
1
cell
1
conventional dendritic cell
1
cortical cell of adrenal gland
1
fibroblast of the aortic adventitia
1
glial cell
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
leukocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
megakaryocyte
1
memory B cell
1
mesothelial cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
neural cell
1
non-classical monocyte
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
parietal cell
1
peptic cell
1
plasmacytoid dendritic cell
1
regulatory T cell
1
skeletal muscle satellite cell
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
thyroid follicular cell
1
type II pneumocyte
Organ
2
connective tissue
Date released
1
February, 2024
1
October, 2022
Software used
1
eigenmt
1
macs
1
rasqual
Lab
2
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP2
files.file_type!
bigWig
Showing 2 of 2 results
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Download
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR847RRB
released
Annotation file set
: Cell type chromatin broad peaks and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP