Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
caQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
2
endothelial cell
1
coronary artery
1
fibroblast of the aortic adventitia
1
liver
1
macrophage
1
mesenchymal stem cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
1
connective tissue
1
liver
Date released
1
May, 2022
1
October, 2022
Software used
21
r
12
chromhmm
9
macs
8
encode-ccres
2
abc
2
eigenmt
2
nospecificsoft_customcode
2
qTLtools
2
rasqual
1
bimbam
1
deeptools
1
deseq2
1
emmax
1
haploview
1
hiccups
1
mach2qtl
1
samtools
1
snap
1
umitools
1
unknown
Lab
1
Karen Mohlke, UNC
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
files.file_type!
bigWig
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR797VBE
released
Annotation file set
: caQTL annotation of liver tissue from pilot study(AJHG2021) in Mohlke Lab
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP