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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
54
H1-hESC
23
trophoblast cell
16
H9
16
chorionic villus
14
prostate gland
12
epithelial cell of prostate
11
trophoblast
10
22Rv1
10
endodermal cell
8
mesodermal cell
7
LNCaP clone FGC
7
PC-3
7
RWPE1
6
H7-hESC
6
HUES6
6
HUES8
6
LNCAP
5
CyT49
5
H4
5
HUES64
5
ectodermal cell
4
C4-2B
4
ELF-1
4
HUES48
4
RWPE2
4
UCSF-4
4
VCaP cell
4
embryonic facial prominence
3
ES-I3
3
cardiac mesoderm primordium
3
hESC H9
3
primordial germ cell
2
first pancreatic bud
1
H1
1
H7
1
VCaP
1
cardiogenic mesoderm
1
embryonic fibroblast
1
luminal epithelial cell of prostatic duct
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
prostate
Organ
1
epithelium
1
prostate gland
0
embryo
Date released
1
February, 2024
Software used
1
deltasvm
Lab
1
Bing Ren, UCSD
Project
1
AMP
RFA
1
AMP
files.file_type!
bigWig
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Download
FileSet
DSR670LSP
released
Annotation file set
: Variant allelic effects annotation of Luminal epithelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP