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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
116
monocyte
64
HeLa-S3
62
A549
54
common myeloid progenitor, CD34-positive
48
CD8-positive, alpha-beta T cell
46
H1-hESC
44
neural progenitor cell
42
B cell
42
hematopoietic multipotent progenitor cell
41
K562
32
CD4-positive, alpha-beta memory T cell
32
fibroblast
31
CD14-positive monocyte
31
endothelial cell
30
macrophage
28
hepatocyte
26
MCF-7
25
adipocyte
24
smooth muscle cell
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
foreskin keratinocyte
22
pericyte cell
21
keratinocyte
21
natural killer cell
21
regulatory T cell
20
breast cancer cell
20
mononuclear cell
19
HFFc6
19
endothelial cell of umbilical vein
19
foreskin fibroblast
19
mesenchymal stem cell
17
HepG2
17
cardiac muscle cell
17
embryonic stem cell
16
GM12878
16
H9
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
retinal pigment epithelial cell
16
skeletal muscle myoblast
15
CD4-positive, alpha-beta T cell
15
T-helper 1 cell
15
astrocyte
15
mammary gland epithelial cell
15
neutrophil
14
EndoC_BH1
14
T-helper 17 cell
14
T-helper 2 cell
14
osteoblast
13
bronchial epithelial cell
13
neurosphere
13
pancreatic beta cell
13
pancreatic ductal cell
13
skeletal muscle satellite cell
12
excitatory neuron
12
fibroblast of dermis
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
11
endothelial cell of hepatic sinusoid
11
epithelial cell of prostate
11
erythroblast
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
pancreatic acinar cell
11
pancreatic alpha cell
11
pancreatic delta cell
10
22Rv1
10
Rhabdomyosarcoma
10
choroid plexus epithelial cell
10
gastric cancer cell
10
kidney tubule cell
10
lymphocyte
10
neuronal stem cell
10
skin fibroblast
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
diffuse intrinsic pontine glioma
9
hepatic stellate cell
9
liposarcoma
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
KARPAS-422 cell
8
MM.1S
8
NAMALWA cell
8
OCI-LY7
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
PC-9
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
glomerular endothelial cell
7
kidney glomerular epithelial cell
7
mature neutrophil
7
renal cortical epithelial cell
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LNCAP
6
NT2-D1 cell
6
OCI-LY1
6
SJSA1
6
SW480
6
WI38
6
chondrocyte
6
fibroblast of breast
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
glomerular visceral epithelial cell
6
hESC cell
6
iPSC derived cell line
6
induced pluripotent stem cell
6
mesodermal cell
6
neuroblastoma cell line
6
smooth muscle cell of the coronary artery
6
type I muscle cell
5
cardiac fibroblast
5
A172
5
A673
5
ACHN
5
CD14-positive, CD16-negative classical monocyte
5
Caki2
5
CyT49
5
Ewing sarcoma
5
GM04503
5
GM04504
5
H4
5
HCT-116 cell
5
HK-2 cell
5
HUES64
5
L1-S8
5
NB4
5
OCI-LY3
5
PC-3
5
RWPE1
5
SGBS preadipocytes
5
acute myeloid leukemia
5
enterocyte
5
epithelial cell of proximal tubule
5
glutamatergic neuron
5
kidney epithelial cell
5
neural cell
5
non-pigmented ciliary epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
pulmonary artery endothelial cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
files.file_type!
tsv
biosample_type!
tissue
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP