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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
72
brain
17
caudate nucleus
16
layer of hippocampus
13
substantia nigra
13
temporal lobe
10
SK-N-DZ
10
SK-N-SH
10
angular gyrus
10
cerebellum
10
choroid plexus epithelial cell
10
frontal cortex
10
pituitary stalk
10
putamen
9
cingulate gyrus
8
SK-N-MC
8
globus pallidus
8
midbrain
7
Ammon's horn
7
BE(2)-C
6
Brodmann (1909) area 46
6
Daoy
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
medulla oblongata
6
middle frontal gyrus
6
pons
5
cardiac fibroblast
5
A172
5
M059J
5
brain microvascular endothelial cell
5
cerebellar cortex
4
H54
4
U-87 MG
4
brain pericyte
4
inferior parietal cortex
4
medulloblastoma
3
prefrontal cortex
2
amygdala
2
dorsolateral prefrontal cortex
2
hypothalamus
2
middle frontal area 46
2
nucleus accumbens
2
pituitary gland
1
brain microvascular endothelial cell
1
BE2C
1
Brodmann (1909) area 9
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
anterior cingulate cortex
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac fibroblast
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
claustrum of brain
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal pole
1
hippocampal neuron
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
mid-frontal lobe
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
files.file_type!
tsv
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP