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Citing CMDGA
Clear Filters
Annotation type
910
accessible chromatin
683
gene expression
524
target gene predictions
171
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
2
Others
Annotation type Category
3
quantitative proteomics
ChIP-seq
Available data
3
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
2
cartilage tissue
1
Pancreatic islets
1
cerebrospinal fluid
Organ
2
connective tissue
1
bodily fluid
Life stage
3
adult
Date released
3
August, 2021
1
May, 2020
1
November, 2019
Software used
2
fastqtl
2
peer
1
r
Lab
2
ITG
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
3
AMP
2
ITG
RFA
3
AMP
2
ITG
files.file_type!
xls
annotation_type_category!
ChIP-seq
Showing 5 of 5 results
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FileSet
DSR561OLH
released
Annotation file set
: pQTLs from CSF levels of 1,126 proteins in 133 subjects by performing a genome-wide association analysis of 514,227 SNPs
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524ZAH
released
Annotation file set
: pQTL of low-grade (intact; preserved) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR048FDK
released
Annotation file set
: Test annotation
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR942GKV
released
Annotation file set
: Annotation for gene TSS
Lab:
Kyle Gaulton, UCSD
Project:
AMP