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Annotation type
11
accessible chromatin
8
chromatin state
8
target gene predictions
6
candidate regulatory elements
3
gene expression
1
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
3
Gene expression levels
Annotation type Category
2
snRNA-seq
1
RNA-seq
Available data
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
4
hepatocyte
2
islet of Langerhans
2
skeletal muscle fiber
2
skeletal muscle satellite cell
1
adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
leukocyte
1
mesangial cell
1
mesenchymal cell
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
neural cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
pancreatic stellate cell
1
pericardium fibroblast
1
renal cortical epithelial cell
1
skeletal muscle myoblast
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
2
musculature of body
1
connective tissue
Life stage
1
adult
Date released
2
February, 2024
1
February, 2020
Software used
3
r
2
deeptools
2
samtools
2
umitools
Lab
2
Stephen Parker, UMich
1
AMP-T2D consortium
Project
3
AMP
RFA
2
AMP2
1
AMP
files.file_type!
xls
tsv
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FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR147UBG
released
Annotation file set
: Gene expression levels of Skeletal muscle satellite cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP