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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
binding sites
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
48
liver
36
hepatocyte
14
HepG2
10
endothelial cell of hepatic sinusoid
10
hepatic stellate cell
9
right lobe of liver
5
HuH-7
4
pancreatic endothelial cell
3
HuH-7.5
3
hepatocyte(AFP)
1
Liver fetal (hepatocyte)
Disease term
3
hepatocellular carcinoma
Organ
5
liver
Life stage
3
adult
Date released
3
September, 2022
1
February, 2021
1
June, 2020
Software used
2
macs
2
r
1
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
xls
annotation_type!
binding sites
Showing 5 of 5 results
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Download
FileSet
DSR203ONK
released
Annotation file set
: Candidate regulatory elements for BSS00718 HuH-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR628THR
released
Annotation file set
: Target gene predictions for BSS00718 HuH-7 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR425WPB
released
Annotation file set
: Chromatin states for BSS00718 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR538IZE
released
Annotation file set
: Histone modifications annotation for Liver HuH-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR949OAS
released
Annotation file set
: Accessible chromatin annotation for Liver HuH-7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP