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Schema
Citing CMDGA
Clear Filters
Annotation type
47
accessible chromatin
45
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
14
eQTL
6
histone modifications
5
Fine-mapped variants
5
binding sites
5
variant allelic effects
2
sQTL
2
variant to gene
Annotation Category
5
Genetic variant effects
Annotation type Category
2
ATAC-seq
2
DNase-seq
1
snATAC-seq
Available data
5
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
1
cell line
1
primary cell
Biosample term
1
EndoC_BH1
1
body of pancreas
1
islet of Langerhans
1
pancreas
1
pancreatic alpha cell
Organ
17
brain
16
kidney
15
epithelium
13
vasculature
10
heart
9
blood vessel
9
connective tissue
8
limb
5
musculature of body
5
pancreas
4
artery
3
adipose tissue
3
liver
3
ureter
2
eye
2
nerve
1
vein
Life stage
3
adult
Date released
February, 2024
4
May, 2020
1
February, 2021
Software used
5
deltasvm
Lab
4
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
5
AMP
RFA
5
AMP
files.file_type!
xls
month_released!
February, 2024
Showing 5 of 5 results
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FileSet
DSR159BKA
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic islet ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR871UFR
released
Annotation file set
: Genetic variants with deltaSVM predictions in EndoB-CH1 beta cell ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR993IYU
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreas body DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR848MLC
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreas DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR884MOQ
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic alpha cell snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP