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Schema
Citing CMDGA
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Annotation type
5
accessible chromatin
5
candidate regulatory elements
5
target gene predictions
3
chromatin state
1
binding sites
1
eQTL
1
histone modifications
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
4
DNase-seq
1
ATAC-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
8
EndoC_BH1
8
pancreatic ductal cell
7
islet of Langerhans
7
pancreatic acinar cell
7
pancreatic beta cell
6
pancreatic alpha cell
5
pancreas
4
pancreatic delta cell
4
pancreatic stellate cell
2
pancreatic polypeptide-secreting cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
type B pancreatic cell
Organ
5
pancreas
0
vagina
Life stage
3
adult
Date released
2
January, 2020
2
June, 2020
1
October, 2019
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
files.file_type!
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Showing 5 of 5 results
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FileSet
DSR701SSG
released
Annotation file set
: Accessible chromatin annotation for Pancreas Pancreas from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR109RRW
released
Annotation file set
: Accessible chromatin annotation for Pancreas Body of pancreas from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR725IPD
released
Annotation file set
: Accessible chromatin annotation of pancreas body from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR311EAH
released
Annotation file set
: Accessible chromatin annotation of pancreas from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR874TCD
released
Annotation file set
: Body of pancreas accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP