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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
109
monocyte
66
heart
65
stomach
58
kidney
52
brain
51
muscle of arm
50
lung
47
CD8-positive, alpha-beta T cell
47
small intestine
46
adrenal gland
45
placenta
43
large intestine
43
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
37
thymus
35
neural progenitor cell
35
retina
34
B cell
34
right lung
32
hematopoietic multipotent progenitor cell
32
liver
31
endothelial cell
31
renal cortex interstitium
31
renal pelvis
31
right kidney
29
fibroblast
27
CD14-positive monocyte
27
left kidney
26
spleen
24
heart left ventricle
23
CD4-positive, alpha-beta memory T cell
23
adipocyte
22
hepatocyte
22
smooth muscle cell
22
spinal cord
21
pericyte cell
20
adipose tissue
20
pigmented layer of retina
19
macrophage
19
pancreas
18
foreskin keratinocyte
18
sigmoid colon
17
T cell
17
islet of Langerhans
17
natural killer cell
17
trophoblast cell
16
psoas muscle
16
regulatory T cell
15
CD8-positive, alpha-beta memory T cell
15
astrocyte
15
endothelial cell of umbilical vein
15
foreskin fibroblast
15
keratinocyte
15
mesenchymal stem cell
15
ovary
15
retinal pigment epithelial cell
14
body of pancreas
14
gastrocnemius medialis
14
mononuclear cell
14
osteoblast
14
pancreatic ductal cell
14
tibial nerve
14
transverse colon
13
cardiac muscle cell
13
excitatory neuron
13
fibroblast of lung
13
heart right ventricle
13
mammary epithelial cell
13
mammary gland epithelial cell
13
muscle of trunk
13
skeletal muscle myoblast
13
testis
13
thyroid gland
13
upper lobe of left lung
12
CD4-positive, alpha-beta T cell
12
T-helper 1 cell
12
caudate nucleus
12
chorionic villus
12
coronary artery
12
endothelial cell of hepatic sinusoid
12
layer of hippocampus
12
pancreatic beta cell
11
Peyer's patch
11
endocrine pancreas
11
pancreatic alpha cell
11
prostate gland
10
T-helper 17 cell
10
T-helper 2 cell
10
bronchial epithelial cell
10
left cardiac atrium
10
left renal pelvis
10
neuronal stem cell
10
neurosphere
10
pancreatic acinar cell
10
pancreatic delta cell
10
right atrium auricular region
10
right renal pelvis
10
skeletal muscle tissue
10
tibial artery
9
breast epithelium
9
erythroblast
9
esophagus squamous epithelium
9
fibroblast of cardiac tissue
9
fibroblast of dermis
9
left renal cortex interstitium
9
naive thymus-derived CD4-positive, alpha-beta T cell
9
neutrophil
9
omental fat pad
9
skeletal muscle satellite cell
9
substantia nigra
9
temporal lobe
8
T-cell acute lymphoblastic leukemia
8
aorta
8
ascending aorta
8
colonic mucosa
8
dermis blood vessel endothelial cell
8
embryonic stem cell
8
esophagus muscularis mucosa
8
foreskin melanocyte
8
glutamatergic neuron
8
lower leg skin
8
mesendoderm
8
neuroblastoma cell line
8
right renal cortex interstitium
8
skin fibroblast
8
thoracic aorta
8
trophoblast
7
CD4-positive helper T cell
7
cerebellum
7
chorion membrane
7
cingulate gyrus
7
duodenal mucosa
7
epithelial cell of prostate
7
esophagus
7
eye
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
7
frontal cortex
7
kidney tubule cell
7
mucosa of rectum
7
parathyroid adenoma
7
skeletal muscle fiber
7
tongue
6
Ammon's horn
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
angular gyrus
6
choroid plexus epithelial cell
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dendritic cell
6
endodermal cell
6
enterocyte
6
epithelial cell of proximal tubule
6
fibroblast of breast
6
gastroesophageal sphincter
6
globus pallidus
6
hepatic stellate cell
6
limb
6
luminal epithelial cell of mammary gland
6
memory B cell
6
mesodermal cell
6
midbrain
6
muscle layer of colon
6
muscle layer of duodenum
6
myoepithelial cell of mammary gland
6
naive T cell
6
occipital lobe
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
pulmonary artery endothelial cell
6
putamen
6
renal cortical epithelial cell
6
stomach smooth muscle
6
subcutaneous adipose tissue
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
SGBS preadipocytes
5
Th1 cell
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
basal cell
5
bipolar neuron
5
chondrocyte
5
epithelial cell of esophagus
5
gabaergic neuron
5
glomerular endothelial cell
5
glomerular visceral epithelial cell
5
inhibitory neuron
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
mast cell
5
myofibroblast cell
5
myotube
5
naive B cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_type!
cell line
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP