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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
Biosample term
31
endothelial cell
22
hepatocyte
20
pigmented layer of retina
19
keratinocyte
18
foreskin keratinocyte
15
endothelial cell of umbilical vein
15
pancreatic ductal cell
15
retinal pigment epithelial cell
13
mammary gland epithelial cell
12
endothelial cell of hepatic sinusoid
12
pancreatic beta cell
11
pancreatic acinar cell
11
pancreatic alpha cell
10
EndoC_BH1
10
bronchial epithelial cell
10
epithelial cell of prostate
10
mammary epithelial cell
10
pancreatic delta cell
9
breast epithelium
9
choroid plexus epithelial cell
9
esophagus squamous epithelium
8
colon epithelial cell
8
dermis blood vessel endothelial cell
7
glomerular visceral epithelial cell
7
kidney tubule cell
7
type II pneumocyte
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
epithelial cell of proximal tubule
6
luminal epithelial cell of mammary gland
6
myoepithelial cell of mammary gland
6
pulmonary artery endothelial cell
6
renal cortical epithelial cell
5
epithelial cell of esophagus
5
glomerular endothelial cell
5
kidney epithelial cell
5
kidney glomerular epithelial cell
5
tracheal epithelial cell
4
aortic endothelial cell
4
brain microvascular endothelial cell
4
dermis microvascular lymphatic vessel endothelial cell
4
endothelial cell of lymphatic vessel
4
iris pigment epithelial cell
4
lung microvascular endothelial cell
4
mesothelial cell
4
non-pigmented ciliary epithelial cell
4
pancreatic A cell
4
pancreatic polypeptide-secreting cell
4
type B pancreatic cell
4
type I pneumocyte
3
club cell
3
endocardial cell
3
goblet cell
3
kidney capillary endothelial cell
3
parietal cell
3
peptic cell
3
thyroid follicular cell
2
basal cell of epidermis
2
capillary endothelial cell
2
cardiac endothelial cell
2
eccrine cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
epidermal melanocyte
2
epithelial cell of amnion
2
foveolar cell of stomach
2
granular cell of epidermis
2
kidney epithelium
2
meso-epithelial cell
2
myoepithelial cell
2
non keratinizing barrier epithelial cell
2
paneth cell
2
respiratory goblet cell
2
small intestine goblet cell
2
stomach neuroendocrine cell
2
type I cell of adrenal cortex
2
type II cell of adrenal cortex
2
vein endothelial cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
amniotic epithelial cell
1
bronchial goblet cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
corneal epithelium
1
endothelial cell of coronary artery
1
enteroendocrine cell
1
gastric goblet cell
1
glomerular epithelium
1
granulosa cell
1
intestinal epithelial cell
1
intestinal epithelium
1
kidney distal convoluted tubule epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
nephron tubule
1
neuroendocrine cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
parietal epithelial cell
1
placental villus capillary endothelial cell
1
renal connecting tubule
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
ureteric bud
1
urothelial cell
Organ
4
epithelium
4
lymphatic vessel
4
skin of body
4
vasculature
Life stage
2
unknown
Date released
3
February, 2021
1
June, 2020
Software used
2
encode-ccres
2
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR307XVK
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis microvascular lymphatic vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR570CLQ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE dermis microvascular lymphatic vessel endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR557WEE
released
Annotation file set
: Binding sites annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR841NUD
released
Annotation file set
: Accessible chromatin annotation for Cardiovascular HMVEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP