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Schema
Citing CMDGA
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Annotation type
3
chromatin state
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ChIP-seq
1
scRNA-seq
Available data
3
bed bed9+
1
bed bed3+
1
tsv
1
txt
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
15
epithelial cell of proximal tubule
13
glomerular endothelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
4
inflammatory macrophage
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
3
CD4-positive, alpha-beta T cell
3
adult endothelial progenitor cell
3
endothelial cell
3
glomerular visceral epithelial cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney interstitial cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
mesangial cell
2
CD8-positive, alpha-beta T cell
2
erythroblast
2
kidney inner medulla collecting duct intercalated cell
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-2 B cell
1
BL-2 cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
DG-75 cell
1
JVM-2 cell
1
KARPAS-422 cell
1
SUDHL5
1
T-helper 17 cell
1
U-266 cell
1
Z-138
1
dendritic cell
1
effector CD8-positive, alpha-beta T cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
macrophage
1
mature eosinophil
1
natural killer cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal principal cell
Life stage
4
adult
Date released
3
May, 2022
1
August, 2021
Software used
3
chromhmm
1
r
1
seurat
Lab
3
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
4
AMP
RFA
3
AMP
1
AMP2
Showing 4 of 4 results
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Download
FileSet
DSR950IZH
released
Annotation file set
: Chromatin state of inflammatory macrophage from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR894REO
released
Annotation file set
: Chromatin state of inflammatory macrophage from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR676EKV
released
Annotation file set
: Chromatin state of inflammatory macrophage from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR878WTQ
released
Annotation file set
: Gene expression of kidney from Katalin Susztak FNIH Project scRNA-seq for inflammatory macrophage
Lab:
Katalin Susztak, Upenn
Project:
AMP