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Schema
Citing CMDGA
Clear Filters
Annotation type
2
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
2
bed bed9
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
Biosample term
21
heart
19
stomach
18
brain
16
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
right kidney
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
8
B cell
8
heart left ventricle
7
CD8-positive, alpha-beta memory T cell
7
liver
7
spinal cord
6
adipose tissue
6
mononuclear cell
6
spleen
5
embryonic stem cell
5
heart right ventricle
5
sigmoid colon
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
angular gyrus
4
aorta
4
body of pancreas
4
chorionic villus
endocrine pancreas
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
gastrocnemius medialis
4
muscle of trunk
4
neural progenitor cell
4
ovary
4
psoas muscle
4
temporal lobe
4
thyroid gland
4
tibial nerve
4
transverse colon
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
ascending aorta
3
caudate nucleus
3
chorion membrane
3
coronary artery
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
layer of hippocampus
3
mammary gland epithelial cell
3
mesenchymal stem cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
regulatory T cell
3
retina
3
right cardiac atrium
3
skeletal muscle tissue
3
testis
3
thoracic aorta
3
tibial artery
3
upper lobe of left lung
2
Brodmann (1909) area 46
2
adipocyte
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
frontal cortex
2
germinal matrix
2
hepatocyte
2
keratinocyte
2
kidney tubule cell
2
left renal cortex interstitium
2
left renal pelvis
2
limb
2
lower leg skin
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neutrophil
2
omental fat pad
2
pancreas
2
parathyroid adenoma
2
prostate gland
2
right atrium auricular region
2
right renal cortex interstitium
2
right renal pelvis
2
skeletal muscle myoblast
2
skeletal muscle satellite cell
2
skin fibroblast
2
stomach smooth muscle
2
substantia nigra
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
Ammon's horn
1
CD1c-positive myeloid dendritic cell
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
arm bone
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
astrocyte of the spinal cord
1
bipolar neuron
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
ectodermal cell
1
embryonic facial prominence
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
femur
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
foreskin melanocyte
1
gastroesophageal sphincter
1
germinal center
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
hepatic stellate cell
1
inferior parietal cortex
1
iris pigment epithelial cell
1
islet precursor cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
left cardiac atrium
1
leg bone
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary stem cell
1
medulla oblongata
1
mesendoderm
1
mesodermal cell
1
midbrain
1
middle frontal gyrus
1
mucosa of stomach
1
neural cell
1
neuron
1
non-pigmented ciliary epithelial cell
1
occipital lobe
1
olfactory neurosphere cell line
1
osteoblast
1
pericyte cell
1
pons
1
pulmonary artery endothelial cell
1
putamen
1
rectum smooth muscle tissue
1
regular cardiac myocyte
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
1
right lobe of liver
1
skeletal muscle cell
1
skin of body
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
stromal cell of bone marrow
Organ
2
embryo
Life stage
2
embryonic
Date released
2
September, 2022
Software used
2
chromhmm
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
cell line
biosample_term_name!
endocrine pancreas
Showing 2 of 2 results
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Download
FileSet
DSR622CNM
released
Annotation file set
: Chromatin states for BSS00287 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR022DVM
released
Annotation file set
: Chromatin states for BSS00285 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP