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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
6
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
primary cell
Biosample term
16
retina
13
pigmented layer of retina
9
kidney
4
islet of Langerhans
3
coronary artery
3
heart
3
heart left ventricle
3
pancreas
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SGBS preadipocytes
2
liver
2
omental fat pad
2
pancreatic ductal cell
2
pancreatic stellate cell
2
retinal pigment epithelial cell
2
right atrium auricular region
2
subcutaneous adipose tissue
2
tibial artery
2
tibial nerve
1
hindlimb muscle
1
Ammon's horn
1
EndoC_BH1
1
HepG2
1
Schwann cell
1
adipocyte
1
adipose tissue
1
ascending aorta
1
brain
1
cardiac muscle cell
1
cardiac precursors
1
caudate nucleus
1
cerebellar cortex
1
cerebellum
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
endothelial cell
1
excitatory neuron
1
fetal heart
1
forelimb muscle
1
frontal cortex
1
globus pallidus
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hippocampal neuron
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
lower motor neuron
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
muscle of arm
1
muscle of leg
1
occipital lobe
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pons
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
putamen
1
renal cortex interstitium
1
renal pelvis
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
smooth muscle cell of the coronary artery
1
spleen
1
superior temporal gyrus
1
thoracic aorta
1
tissue-resident macrophage
1
type B pancreatic cell
Organ
2
epithelium
2
eye
Date released
2
November, 2022
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR246ESC
released
Annotation file set
: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) with cigarette smoke extract (CSE) treatment
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR287DMU
released
Annotation file set
: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using viral (IMR90.4) with cigarette smoke extract (CSE) treatment
Lab:
AMP-T2D consortium
Project:
AMP