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Schema
Citing CMDGA
Clear Filters
Annotation type
4
accessible chromatin
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
snATAC-seq
Available data
6
bed bed3+
4
bigWig
File set status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
11
endothelial cell
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
type II pneumocyte
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
pancreatic delta cell
3
pancreatic ductal cell
3
type I pneumocyte
2
capillary endothelial cell
2
club cell
2
endocardial cell
2
endothelial cell of hepatic sinusoid
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
mesothelial cell
1
basal cell of epidermis
1
cardiac endothelial cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
eccrine cell
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
foveolar cell of stomach
1
gastric goblet cell
1
goblet cell
1
granular cell of epidermis
1
hepatocyte
1
lung neuroendocrine cell
1
mammary gland epithelial cell
1
myoepithelial cell
1
neuroendocrine cell
1
non keratinizing barrier epithelial cell
1
pancreatic polypeptide-secreting cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
placental villus capillary endothelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
ureteric bud
Organ
4
epithelium
4
pancreas
Date released
2
January, 2021
2
November, 2021
Software used
4
macs
Lab
2
Bing Ren, UCSD
2
Kyle Gaulton, UCSD
Project
AMP
2
ENCODE
2
T1D
RFA
2
ENCODE3
2
T1D
award.project!
AMP
Showing 4 of 4 results
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Download
FileSet
DSR276TNF
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Beta Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR530GKK
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Beta Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR478ONG
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of INSlow_beta
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR179DUH
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of INShigh_beta
Lab:
Kyle Gaulton, UCSD
Project:
T1D