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Schema
Citing CMDGA
Clear Filters
Annotation type
13
eQTL
13
gene expression
12
accessible chromatin
6
chromatin state
5
target gene predictions
3
binding sites
2
Fine-mapped variants
2
candidate regulatory elements
2
histone modifications
2
sQTL
2
variant allelic effects
2
variant to gene
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
6
bed bed3+
1
bigBed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
tissue
Biosample term
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
5
embryonic stem cell
5
left cardiac atrium
4
adipocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
endothelial cell of umbilical vein
3
inflammatory macrophage
3
temporal lobe
2
ESC derived cell line
2
angular gyrus
2
aorta
2
brain
2
erythroblast
2
islet of Langerhans
2
liver
2
muscle of leg
1
BL-2 cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
GM12878
1
H1-hESC
1
HepG2
1
JVM-2 cell
1
K562
1
KARPAS-422 cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
ascending aorta
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
coronary artery
1
duodenal mucosa
1
fibroblast of lung
1
germinal matrix
1
heart
1
heart left ventricle
1
keratinocyte
1
kidney
1
layer of hippocampus
1
mammary epithelial cell
1
mature eosinophil
1
mesenchymal stem cell
1
mid-frontal lobe
1
mucosa of rectum
1
pancreas
1
rectum smooth muscle tissue
1
right cardiac atrium
1
skeletal muscle
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
1
substantia nigra
1
thoracic aorta
1
tibial artery
1
tibial nerve
Organ
4
connective tissue
2
pancreas
Date released
6
August, 2017
September, 2022
April, 2019
Software used
6
chromhmm
Lab
5
Stephen Parker, UMich
1
AMP-T2D consortium
Project
6
AMP
RFA
6
AMP
month_released!
April, 2019
September, 2022
Showing 6 of 6 results
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Download
FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR679993
released
Annotation file set
: ChromHMM 13-state model for Islets
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR043890
released
Annotation file set
: ChromHMM 18-state model for Islets
Lab:
AMP-T2D consortium
Project:
AMP