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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
7
K562
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
4
aorta
4
ascending aorta
4
peripheral blood mononuclear cell
4
thoracic aorta
3
coronary artery
3
lung microvascular endothelial cell
3
tibial artery
2
CMK
2
GM06990
2
GM12875
2
GM12878
2
HAP-1
2
HL-60
2
KBM-7
2
NAMALWA
2
NAMALWA cell
2
NB4
2
OCI-LY7
2
RPMI8226
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
pulmonary artery endothelial cell
2
smooth muscle cell of the brain vasculature
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
Karpas-422
1
kidney capillary endothelial cell
Organ
2
brain
2
epithelium
2
vasculature
0
blood
Life stage
2
unknown
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
April, 2019
Showing 2 of 2 results
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Download
FileSet
DSR064DCO
released
Annotation file set
: Candidate regulatory elements for BSS00218 choroid plexus epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR982GZF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE choroid plexus epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP