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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
13
large intestine
5
endothelial cell of umbilical vein
5
sigmoid colon
4
foreskin keratinocyte
4
transverse colon
3
colonic mucosa
3
keratinocyte
3
mammary gland epithelial cell
3
mucosa of rectum
2
breast epithelium
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
epithelial cell of prostate
2
esophagus squamous epithelium
2
hepatocyte
2
kidney tubule cell
2
muscle layer of colon
2
myoepithelial cell of mammary gland
2
rectum smooth muscle tissue
1
HCT116
1
HT-29
1
SW480
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
non-pigmented ciliary epithelial cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
Disease term
1
colorectal adenocarcinoma
Organ
1
intestine
1
large intestine
0
epithelium
Life stage
1
adult
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
April, 2020
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Download
FileSet
DSR361WKN
released
Annotation file set
: Chromatin states for BSS01682 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP