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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
8
SK-N-DZ
8
SK-N-SH
6
NAMALWA cell
5
glomerular visceral epithelial cell
5
heart
5
psoas muscle
4
A673
4
CMK
4
DND-41
4
Daoy
4
G401
4
HepG2
4
MG63
4
SJCRH30
4
SK-N-MC
4
WERI-Rb-1
4
heart left ventricle
4
heart right ventricle
4
lung
4
sigmoid colon
4
small intestine
4
spleen
4
stomach
4
thymus
3
BE(2)-C
3
CD14-positive, CD16-negative classical monocyte
3
GM03348
3
GM08714
3
lymphocyte
3
medulloblastoma
3
urothelium cell line
2
NAMALWA
2
alternatively activated macrophage
2
erythroblast
2
mature neutrophil
1
BE2C
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
D721Med
1
GM20000
1
Jurkat, Clone E6-1
1
cardiac atrium fibroblast
1
liver
1
pancreatic ductal cell
Organ
4
lung
Life stage
56
embryonic
6
adult
3
child
1
young adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
August, 2018
Showing 4 of 4 results
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Download
FileSet
DSR934KAC
released
Annotation file set
: Candidate regulatory elements for BSS01201 lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR417JTW
released
Annotation file set
: Target gene predictions for BSS01201 lung from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR526SLH
released
Annotation file set
: Chromatin states for BSS01201 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR300HLO
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE lung
Lab:
AMP-T2D consortium
Project:
AMP