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Schema
Citing CMDGA
Clear Filters
Annotation type
1601
candidate regulatory elements
1308
target gene predictions
971
histone modifications
893
chromatin state
887
accessible chromatin
812
binding sites
662
gene expression
167
differential activity
165
eQTL
130
variant allelic effects
65
Fine-mapped variants
11
caQTL
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
3
variant to gene
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
tsv
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
islet of Langerhans
1
tissue
Organ
2
pancreas
Date released
2
March, 2023
August, 2020
1
August, 2022
Software used
2
qTLtools
1
combined S2G strategy
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
August, 2020
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FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860BOU
released
Annotation file set
: Variant to gene predictions in 1000G
Lab:
AMP-T2D consortium
Project:
AMP