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Schema
Citing CMDGA
Clear Filters
Annotation type
1455
candidate regulatory elements
1228
target gene predictions
965
histone modifications
860
accessible chromatin
819
chromatin state
806
binding sites
652
gene expression
166
differential activity
159
eQTL
123
variant allelic effects
62
Fine-mapped variants
9
caQTL
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
3
variant to gene
1
representative DNase hypersensitivity sites
Annotation Category
3
Genetic variant effects
Annotation type Category
2
RNA-seq
Available data
2
tsv
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
2
islet of Langerhans
1
tissue
Organ
2
pancreas
Date released
2
March, 2023
August, 2020
1
August, 2022
Software used
2
qTLtools
1
combined S2G strategy
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
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August, 2020
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FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR860BOU
released
Annotation file set
: Variant to gene predictions in 1000G
Lab:
AMP-T2D consortium
Project:
AMP