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Annotation type
8
target gene predictions
Annotation Category
8
Target gene links
Annotation type Category
149
ChIP-seq
114
DNase-seq
8
ATAC-seq
5
H3K27ac ChIP-Seq
4
RNA-seq
3
snATAC-seq
2
HiC
1
pCHi-C
Available data
8
bed bed3+
File set status
8
released
Genome assembly (visualization)
8
hg19
3
GRCh38
Organism
8
Homo sapiens
Biosample type
3
primary cell
3
tissue
2
cell line
Biosample term
3
colon epithelial cell
1
HCT-116 cell
1
HT-29
1
large intestine
1
sigmoid colon
1
transverse colon
Organ
119
epithelium
52
connective tissue
47
eye
35
pancreas
19
liver
19
vasculature
18
blood vessel
17
heart
15
kidney
14
intestine
12
brain
12
limb
11
artery
10
adipose tissue
10
pituitary gland
10
skin of body
9
musculature of body
8
large intestine
7
bone element
7
lung
7
skeleton
6
adrenal gland
6
stomach
5
embryo
5
mammary gland
4
blood
4
bodily fluid
3
extraembryonic component
3
small intestine
3
uterus
2
esophagus
2
gonad
2
nerve
2
ovary
2
prostate gland
2
spleen
2
thyroid gland
1
breast
1
bronchus
1
lymph node
1
lymphatic vessel
1
penis
1
placenta
1
spinal cord
1
thymus
1
vein
Date released
5
May, 2021
3
November, 2021
Software used
8
abc
Lab
5
Jesse Engreitz, Stanford University
3
Bing Ren, UCSD
Project
5
AMP
3
ENCODE
RFA
5
AMP
3
ENCODE3
month_released!
August, 2020
Showing 8 of 8 results
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Download
FileSet
DSR267UWF
released
Annotation file set
: Target gene predictions of Colon Epithelial Cell 3 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR015DAN
released
Annotation file set
: Target gene predictions of Colon Epithelial Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR659KQD
released
Annotation file set
: Target gene predictions of Colon Epithelial Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR797VJC
released
Annotation file set
: enhancer-gene predicton of HT29 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR692JFQ
released
Annotation file set
: enhancer-gene predicton of transverse_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR284ZHE
released
Annotation file set
: enhancer-gene predicton of sigmoid_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR232GSH
released
Annotation file set
: enhancer-gene predicton of large_intestine_fetal-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR355NCA
released
Annotation file set
: enhancer-gene predicton of HCT116-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP