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Citing CMDGA
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Annotation type
1
binding sites
1
candidate regulatory elements
1
histone modifications
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
37
HiC
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
89
monocyte
60
stomach
58
heart
49
brain
49
lung
49
muscle of arm
46
kidney
44
small intestine
43
placenta
42
adrenal gland
41
A549
41
large intestine
41
muscle of back
40
common myeloid progenitor, CD34-positive
40
muscle of leg
39
left lung
37
CD8-positive, alpha-beta T cell
33
right lung
33
thymus
31
hematopoietic multipotent progenitor cell
30
right kidney
29
renal cortex interstitium
28
renal pelvis
27
left kidney
24
B cell
23
CD4-positive, alpha-beta memory T cell
23
liver
23
spinal cord
22
spleen
20
breast cancer cell
18
MCF-7
17
foreskin keratinocyte
16
heart left ventricle
15
CD8-positive, alpha-beta memory T cell
15
K562
15
neural progenitor cell
15
trophoblast cell
14
mononuclear cell
14
sigmoid colon
12
CD14-positive monocyte
12
adipose tissue
12
foreskin fibroblast
12
neuroblastoma cell
12
ovary
12
transverse colon
12
upper lobe of left lung
11
chorionic villus
11
gastrocnemius medialis
11
muscle of trunk
11
psoas muscle
11
testis
11
thyroid gland
10
Peyer's patch
10
body of pancreas
10
bronchial epithelial cell
10
endocrine pancreas
10
gastric cancer cell
10
keratinocyte
10
layer of hippocampus
10
natural killer cell
10
skeletal muscle tissue
9
HepG2
9
Rhabdomyosarcoma
9
T cell
9
T-helper 1 cell
9
cardiac muscle cell
9
caudate nucleus
9
diffuse intrinsic pontine glioma
9
fibroblast of cardiac tissue
9
heart right ventricle
9
liposarcoma
9
mammary epithelial cell
9
neurosphere
9
prostate gland
9
regulatory T cell
9
retina
8
22Rv1
8
CD4-positive, alpha-beta T cell
8
H9
8
HeLa-S3
8
endothelial cell of umbilical vein
8
mammary gland epithelial cell
8
neuronal stem cell
8
tibial nerve
7
B-lymphoblastoid cell line
7
T-helper 17 cell
7
adipocyte
7
breast epithelium
7
esophageal adenocarcinoma
7
fibroblast cell line
7
fibroblast of lung
7
left renal cortex interstitium
7
lower leg skin
7
neutrophil
7
pancreas
7
right renal pelvis
7
temporal lobe
6
Chondroid Chordoma
6
HEK293
6
NAMALWA cell
6
SK-N-DZ
6
SK-N-SH
6
T-cell acute lymphoblastic leukemia
6
T-helper 2 cell
6
aorta
6
endometrium adenocarcinoma
6
epithelial cell of prostate
6
esophagus squamous epithelium
6
eye
6
fibroblast of dermis
6
hESC cell
6
immortal human breast epithelial cell line cell
6
mesenchymal stem cell
6
neuroblastoma cell line
6
omental fat pad
6
osteoblast
6
parathyroid adenoma
6
substantia nigra
5
CD1c-positive myeloid dendritic cell
5
CMK
5
Ewing sarcoma
5
GM06990
5
GM12864
5
GM12865
5
GM12875
5
GM12878
5
GM23248
5
HAP-1
5
HL-60
5
HT-29
5
IMR-90
5
LHCN-M2
5
LNCaP clone FGC
5
MG63
5
MM.1S
5
OCI-LY1
5
OCI-LY7
5
PC-3
5
RWPE1
5
SK-N-MC
5
SW480
5
WI38
5
cingulate gyrus
5
colonic mucosa
5
dermis blood vessel endothelial cell
5
endodermal cell
5
esophagus muscularis mucosa
5
foreskin melanocyte
5
hepatocyte
5
left renal pelvis
5
myoepithelial cell of mammary gland
5
osteosarcoma
5
prostate cancer cell line
5
right renal cortex interstitium
5
skeletal muscle myoblast
5
skin fibroblast
5
thoracic aorta
5
tongue
5
trophoblast
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
Brodmann (1909) area 46
4
Caco-2 cell
4
Daoy
4
GM08714
4
GM10248
4
GM10266
4
GM12891
4
GM12892
4
GM19238
4
GM19239
4
GM19240
4
H1-hESC
4
HK-2 cell
4
HS-SY-2 cell
4
HUES6
4
HUES64
4
HuH-7
4
Jurkat
4
KARPAS-422 cell
4
KBM-7
4
LNCAP
4
LoVo cell
4
Mantle cell lymphoma
4
NT2-D1 cell
4
OCI-LY3
4
PC-9
4
RPMI8226
4
Rh-4 cell
4
SJSA1
4
T47D
4
angular gyrus
4
ascending aorta
4
astrocyte
4
cerebellum
Organ
4
embryo
Life stage
2
embryonic
Date released
2
February, 2021
2
September, 2022
Software used
chromhmm
2
macs
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
August, 2021
software_used.software.name!
chromhmm
Showing 4 of 4 results
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR748AAQ
released
Annotation file set
: Target gene predictions for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR416QNM
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR188ZAX
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP