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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
7
mature neutrophil
5
CD14-positive, CD16-negative classical monocyte
4
alternatively activated macrophage
3
CD4-positive, alpha-beta T cell
3
inflammatory macrophage
2
T cell
2
capillary endothelial cell
2
endothelial cell
2
erythroblast
2
extracellular matrix secreting cell
2
fibroblast
2
liver
2
macrophage
2
smooth muscle cell
1
B cell
1
BL-2 cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
JVM-2 cell
1
KARPAS-422 cell
1
SUDHL5
1
U-266 cell
1
Z-138
1
basal cell
1
ciliated cell
1
club cell
1
endothelial cell of artery
1
endothelial cell of lymphatic vessel
1
erythrocyte
1
leukocyte
1
mature eosinophil
1
mesenchymal stem cell
1
myofibroblast cell
1
natural killer cell
1
neuroendocrine cell
1
pericyte cell
1
skeletal muscle satellite cell
1
type I muscle cell
1
type I pneumocyte
1
type II muscle cell
1
type II pneumocyte
Life stage
1
adult
Date released
12
September, 2022
4
November, 2021
2
February, 2024
2
January, 2022
1
April, 2020
1
February, 2021
1
June, 2020
1
May, 2022
Software used
1
macs
Lab
1
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
1
AMP
1
LungMap
RFA
1
AMP2
1
LungMap2
month_released!
August, 2021
Showing 2 of 2 results
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Download
FileSet
DSR476DPZ
released
Annotation file set
: ATAC-seq peaks in T cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR942IYV
released
Annotation file set
: Accessible chromatin annotation of T lymphocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP