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Schema
Citing CMDGA
Clear Filters
Annotation type
140
candidate regulatory elements
76
target gene predictions
71
chromatin state
25
accessible chromatin
7
gene expression
7
variant allelic effects
6
Fine-mapped variants
6
binding sites
6
histone modifications
5
eQTL
2
caQTL
1
differential activity
Annotation Category
7
Gene expression levels
Annotation type Category
5
snRNA-seq
2
RNA-seq
Available data
2
tsv
File set status
7
released
Genome assembly (visualization)
5
hg19
Organism
7
Homo sapiens
Biosample type
5
primary cell
2
tissue
Biosample term
2
skeletal muscle fiber
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
skeletal muscle satellite cell
1
type I muscle cell
1
type II muscle cell
Organ
237
epithelium
191
kidney
42
connective tissue
39
pancreas
33
vasculature
23
liver
22
blood vessel
13
brain
12
heart
10
adipose tissue
7
musculature of body
5
artery
4
bone element
3
intestine
3
lymphatic vessel
2
embryo
2
esophagus
2
gonad
2
large intestine
2
limb
2
skin of body
2
stomach
2
uterus
1
adrenal gland
1
blood
1
bodily fluid
1
breast
1
lung
1
lymphoid tissue
1
mouth
1
ovary
1
pituitary gland
1
prostate gland
1
spinal cord
1
spleen
1
testis
1
thyroid gland
1
tongue
1
urinary bladder
1
vagina
1
vein
Life stage
2
adult
Date released
5
February, 2024
February, 2020
2
March, 2024
Software used
7
r
5
deeptools
5
samtools
5
umitools
Lab
5
Stephen Parker, UMich
2
AMP-T2D consortium
Project
7
AMP
RFA
5
AMP2
2
AMP
month_released!
February, 2020
biosample_type!
cell line
Showing 7 of 7 results
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Download
FileSet
DSR852SKA
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Esophagus - Muscularis.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR834CSA
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Esophagus - Gastroesophageal Junction.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR522PJU
released
Annotation file set
: Cell type gene expression mean TPM and bw of type II muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR928HZI
released
Annotation file set
: Cell type gene expression mean TPM and bw of type I muscle cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR040MIE
released
Annotation file set
: Cell type gene expression mean TPM and bw of neuromuscular junction from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR985XYU
released
Annotation file set
: Cell type gene expression mean TPM and bw of muscle fiber mixed from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP