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Schema
Citing CMDGA
Clear Filters
Annotation type
19
candidate regulatory elements
13
target gene predictions
11
eQTL
10
chromatin state
10
gene expression
7
accessible chromatin
6
Fine-mapped variants
3
variant allelic effects
2
binding sites
2
differential activity
1
histone modifications
Annotation Category
3
Genetic variant effects
2
Gene expression levels
Annotation type Category
2
ATAC-seq
2
RNA-seq
1
DNase-seq
Available data
3
bed bed3+
2
tsv
File set status
5
released
Genome assembly (visualization)
3
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
2
subcutaneous adipose tissue
1
omental fat pad
1
adipose tissue
1
visceral abdominal adipose tissue
Disease term
2
coronary artery disease
Organ
133
epithelium
72
kidney
44
pancreas
33
vasculature
30
connective tissue
21
blood vessel
17
brain
10
heart
8
limb
8
liver
8
musculature of body
6
artery
5
adipose tissue
3
intestine
3
ureter
2
esophagus
2
eye
2
lymphatic vessel
2
nerve
2
stomach
1
adrenal gland
1
bronchus
1
lung
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
1
vein
Life stage
2
adult
Date released
3
May, 2020
2
February, 2024
Software used
3
deltasvm
2
deseq2
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
month_released!
February, 2020
Showing 5 of 5 results
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FileSet
DSR483AIN
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for visceral abdominal adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR639EWK
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR537CNJ
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose omental fat pad DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR088HBN
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose subcutaneous ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP