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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
1
gene expression
Annotation Category
3
Genetic variant effects
1
Gene expression levels
Annotation type Category
4
RNA-seq
Available data
4
tsv
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
15
monocyte
11
cardiomyocytes
11
islet of Langerhans
9
EndoC_BH1
9
endothelial cell
9
extended pluripotent stem (EPS) cells
9
hepatocyte
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
8
H1-hESC
8
pancreatic ductal cell
8
subcutaneous adipose tissue
7
T-helper 1 cell
7
T-helper 17 cell
7
neural progenitor cell
7
regulatory T cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Fibroblast
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Regulatory T Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic beta cell
5
pancreatic delta cell
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
amygdala
4
anterior cingulate cortex
4
ascending aorta
4
body of pancreas
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
caudate nucleus
4
cerebellum (Hemisphere)
4
coronary artery
4
endothelial cell of hepatic sinusoid
4
frontal cortex
4
gamma-delta T cell
4
hypothalamus
4
mesangial cell
4
nephron progenitor
4
nucleus accumbens
4
omental fat pad
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
4
putamen
4
right atrium auricular region
4
right lobe of liver
4
substantia nigra
4
tibial artery
3
CD8-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
T-helper 2 cell
3
adipose tissue
3
adult endothelial progenitor cell
3
central memory CD8-positive, alpha-beta T cell
3
cerebellum
3
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
effector memory CD8-positive, alpha-beta T cell
3
gastrocnemius medialis(Muscle - Skeletal)
3
hepatocyte(AFP)
3
left ventricle myocardium
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
pancreatic quiescent stellate cell
3
tibial nerve
3
visceral abdominal adipose tissue
2
B cell
2
Kupffer cell
2
T follicular helper cell
2
articular chondrocyte
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
heart
2
macrophage
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
natural killer cell
2
osteoblast
2
renal vesicle
2
vascular associated smooth muscle cell
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Schwann cell
1
activated pancreatic stellate cell
1
adipocyte
1
adrenal gland
1
alpha-beta T cell
1
alternatively activated macrophage
1
aorta
1
aorta wall
1
aortic valve
1
astrocyte
1
bladder
1
breast - mammary tissue
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cervix - ectocervix
1
cervix - endocervix
1
cholangiocyte
1
colon - sigmoid
1
colon - transverse
1
cytotoxic T cell
1
dendritic cell
1
dorsolateral prefrontal cortex
1
effector CD8-positive, alpha-beta T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
erythroid lineage cell
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
heart right ventricle
1
hematopoietic multipotent progenitor cell
1
hepatic stellate cell
1
hippocampal neuron
1
inflammatory macrophage
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
left cardiac atrium
1
leukocyte
1
liver
1
lower motor neuron
1
lung
1
mast cell
1
mature B cell
1
meso-epithelial cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
minor salivary gland
1
mitral valve
1
myeloid dendritic cell
1
myocyte
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
ovary
1
pancreatic epsilon cell
1
pancreatic polypeptide-secreting cell
1
pituitary
1
plasma cell
1
prostate
1
pulmonary valve
1
quiescent pancreatic stellate cell
1
right cardiac atrium
1
skeletal muscle
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
spleen
1
stem cell
1
stomach
1
testis
1
thyroid
1
tricuspid valve
1
uterus
1
vagina
Organ
4
brain
Life stage
4
adult
Date released
3
March, 2020
February, 2020
1
January, 2020
Software used
1
gtex_finemapping_eQTL:caveman
1
gtex_finemapping_eQTL:caviar
1
gtex_finemapping_eQTL:dapg
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
month_released!
February, 2020
organ_slims!
kidney
Showing 4 of 4 results
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Download
FileSet
DSR725YUP
released
Annotation file set
: Fine-mapping results from DAPG of amygdala for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR424YDK
released
Annotation file set
: Fine-mapping results from CAVIAR of amygdala for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR519FZM
released
Annotation file set
: Fine-mapping results from CaVEMaN of amygdala for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR737OYG
released
Annotation file set
: Gene expression summary of TPM of brain amygdala from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP