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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
89
heart
86
stomach
81
kidney
72
brain
68
lung
67
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
62
adrenal gland
58
muscle of leg
56
large intestine
54
H1-hESC
54
muscle of back
52
left lung
50
neural progenitor cell
48
liver
48
thymus
45
right lung
44
islet of Langerhans
43
hematopoietic multipotent progenitor cell
42
right kidney
41
K562
40
renal cortex interstitium
40
renal pelvis
38
retina
36
left kidney
35
spinal cord
34
spleen
33
heart left ventricle
31
adipose tissue
26
MCF-7
23
EndoC_BH1
23
sigmoid colon
22
body of pancreas
22
pancreas
22
tibial nerve
21
adipocyte
21
caudate nucleus
20
breast cancer cell
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
HFFc6
19
coronary artery
19
heart right ventricle
19
subcutaneous adipose tissue
18
gastrocnemius medialis
18
thyroid gland
18
transverse colon
17
HepG2
17
embryonic stem cell
17
muscle of trunk
17
right atrium auricular region
17
substantia nigra
17
testis
17
tibial artery
16
GM12878
16
H9
16
chorionic villus
16
induced pluripotent stem cell
16
layer of hippocampus
16
upper lobe of left lung
15
omental fat pad
15
skeletal muscle tissue
14
ascending aorta
14
endocrine pancreas
14
prostate gland
13
Peyer's patch
13
aorta
12
cerebellum
12
frontal cortex
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
mesenchymal stem cell
12
neuroblastoma cell
12
putamen
11
Ammon's horn
11
breast epithelium
11
cardiac muscle cell
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
lymphocyte
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
thoracic aorta
10
trophoblast
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
liposarcoma
9
parathyroid adenoma
9
tongue
9
vagina
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
GM19240
8
HAP-1
8
HL-60
8
HT-29
8
KARPAS-422 cell
8
MM.1S
8
NAMALWA cell
8
cingulate gyrus
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
pituitary stalk
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CMK
7
Caco-2 cell
7
GM12875
7
GM19238
7
GM19239
7
GM23248
7
Jurkat
7
LHCN-M2
7
LNCaP clone FGC
7
LoVo cell
7
MG63
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
chorion membrane
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
neuronal stem cell
7
stomach smooth muscle
7
uterus
6
Brodmann (1909) area 46
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM10248
6
GM10266
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HCT116
6
HUES6
6
HUES8
6
HuH-7
6
KBM-7
6
LNCAP
6
OCI-LY7
6
PC-9
6
SJSA1
6
SW480
6
WI38
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
hESC cell
6
iPSC derived cell line
6
mesodermal cell
6
midbrain
6
middle frontal gyrus
6
mucosa of rectum
6
neuroblastoma cell line
6
pancreatic ductal cell
6
right lobe of liver
6
superior temporal gyrus
6
urinary bladder
5
A172
5
A673
5
ACHN
5
Caki2
5
CyT49
5
Ewing sarcoma
5
GM04503
5
GM04504
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
February, 2020
organ_slims!
placenta
biosample_type!
primary cell
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP