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Schema
Citing CMDGA
Clear Filters
Annotation type
39
target gene predictions
8
gene expression
2
chromatin state
1
accessible chromatin
1
binding sites
1
candidate regulatory elements
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
26
retina
24
heart
24
kidney
22
stomach
20
pigmented layer of retina
19
A549
18
brain
18
monocyte
17
B cell
17
muscle of arm
16
endothelial cell
16
fibroblast
16
lung
16
small intestine
15
adrenal gland
15
muscle of leg
15
placenta
14
large intestine
14
neural progenitor cell
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
left lung
13
macrophage
13
muscle of back
12
right lung
12
thymus
11
T cell
11
hematopoietic multipotent progenitor cell
11
liver
11
pericyte cell
11
renal pelvis
11
right kidney
10
hepatocyte
10
renal cortex interstitium
10
retinal pigment epithelial cell
10
smooth muscle cell
9
CD4-positive, alpha-beta memory T cell
9
astrocyte
9
left kidney
9
spinal cord
8
EndoC_BH1
8
adipocyte
8
adipose tissue
8
heart left ventricle
8
pancreatic beta cell
8
pancreatic ductal cell
8
regulatory T cell
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
K562
7
fibroblast of cardiac tissue
7
islet of Langerhans
7
natural killer cell
7
pancreas
7
pancreatic acinar cell
7
pancreatic alpha cell
6
MCF-7
6
SGBS preadipocytes
6
T-helper 1 cell
6
embryonic stem cell
6
endothelial cell of hepatic sinusoid
6
glutamatergic neuron
6
mononuclear cell
6
sigmoid colon
6
skeletal muscle satellite cell
6
tibial nerve
6
trophoblast cell
5
CD8-positive, alpha-beta T cell
5
T-helper 17 cell
5
T-helper 2 cell
5
caudate nucleus
5
chondrocyte
5
coronary artery
5
erythroblast
5
foreskin keratinocyte
5
gastrocnemius medialis
5
inhibitory neuron
5
mammary gland epithelial cell
5
mesenchymal stem cell
5
osteoblast
5
ovary
5
pancreatic delta cell
5
psoas muscle
5
right atrium auricular region
5
skeletal muscle fiber
5
skin fibroblast
5
thyroid gland
5
tibial artery
5
transverse colon
4
CD14-positive monocyte
4
Peyer's patch
4
body of pancreas
4
chorion membrane
4
chorionic villus
4
colon epithelial cell
4
endocrine pancreas
4
endothelial cell of umbilical vein
4
frontal cortex
4
glomerular visceral epithelial cell
4
heart right ventricle
4
hepatic stellate cell
4
keratinocyte
4
kidney tubule cell
4
memory B cell
4
muscle of trunk
4
omental fat pad
4
pancreatic stellate cell
4
skeletal muscle myoblast
4
testis
4
type II pneumocyte
4
upper lobe of left lung
3
cardiac fibroblast
3
Ammon's horn
3
HeLa-S3
3
NAMALWA cell
3
SK-N-DZ
3
ascending aorta
3
breast epithelium
3
bronchial epithelial cell
3
cardiac muscle cell
3
cerebellum
3
choroid plexus epithelial cell
3
cortical cell of adrenal gland
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
enterocyte
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
esophagus squamous epithelium
3
eye
3
fibroblast of dermis
3
fibroblast of lung
3
foreskin fibroblast
3
gabaergic neuron
3
globus pallidus
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
limb
3
luminal epithelial cell of mammary gland
3
medulla oblongata
3
midbrain
3
naive B cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neuron
3
neurosphere
3
occipital lobe
pons
3
prostate gland
3
putamen
3
renal cortical epithelial cell
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
superior temporal gyrus
3
thoracic aorta
3
tongue
3
trophoblast
3
type I muscle cell
3
type I pneumocyte
3
type II muscle cell
3
urinary bladder
2
22Rv1
2
A172
2
ACHN
2
AG04449 cell
2
AG04450 cell
2
AG08396 cell
2
AG09309 cell
2
AG09319 cell
2
AG10803 cell
2
BE(2)-C
2
BJ cell
2
Brodmann (1909) area 46
2
CD1c-positive myeloid dendritic cell
2
CD4-positive helper T cell
2
CMK
2
Caco-2 cell
2
Caki2
2
Daoy
2
GM03348
2
GM04503
2
GM04504
2
GM06990
2
GM10248
2
GM10266
2
GM12864
2
GM12865
2
GM12878
2
GM18507
2
GM19240
2
GM23248
2
H1-hESC
2
H4
2
H7-hESC
2
HAP-1
Organ
2
embryo
Life stage
1
embryonic
Date released
1
June, 2020
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
February, 2021
biosample_term_name!
pons
Showing 2 of 2 results
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Download
FileSet
DSR702NFK
released
Annotation file set
: Candidate regulatory elements for BSS00478 H1-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR165RXW
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H1 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP