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Schema
Citing CMDGA
Clear Filters
Annotation type
Fine-mapped variants
2
eQTL
1
gene expression
Annotation Category
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
3
RNA-seq
Available data
2
tsv
File set status
3
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
128
monocyte
69
heart
64
stomach
62
HeLa-S3
57
A549
56
brain
56
kidney
52
H1-hESC
51
lung
50
muscle of arm
49
small intestine
48
adrenal gland
45
placenta
44
CD8-positive, alpha-beta T cell
44
muscle of leg
44
neural progenitor cell
41
large intestine
40
common myeloid progenitor, CD34-positive
40
liver
39
left lung
39
muscle of back
38
K562
37
B cell
37
thymus
35
retina
34
endothelial cell
34
islet of Langerhans
34
right lung
32
hematopoietic multipotent progenitor cell
32
right kidney
31
hepatocyte
30
macrophage
30
renal pelvis
29
fibroblast
29
renal cortex interstitium
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
27
adipose tissue
27
heart left ventricle
27
left kidney
26
spinal cord
24
regulatory T cell
24
smooth muscle cell
24
spleen
23
T cell
22
adipocyte
22
pericyte cell
21
CD8-positive, alpha-beta memory T cell
21
EndoC_BH1
21
pancreatic ductal cell
20
T-helper 1 cell
20
pigmented layer of retina
19
HFFc6
19
T-helper 17 cell
19
tibial nerve
18
MCF-7
18
trophoblast cell
17
body of pancreas
17
mononuclear cell
17
pancreas
17
pancreatic beta cell
17
psoas muscle
17
sigmoid colon
16
coronary artery
16
endothelial cell of hepatic sinusoid
16
heart right ventricle
16
natural killer cell
16
ovary
15
T-helper 2 cell
15
astrocyte
15
caudate nucleus
15
mesenchymal stem cell
15
pancreatic acinar cell
15
pancreatic delta cell
15
right atrium auricular region
15
thyroid gland
14
endothelial cell of umbilical vein
14
pancreatic alpha cell
14
tibial artery
13
GM12878
13
HepG2
13
excitatory neuron
13
fibroblast of cardiac tissue
13
fibroblast of lung
13
gastrocnemius medialis
13
neutrophil
13
transverse colon
12
embryonic stem cell
12
endocrine pancreas
12
foreskin keratinocyte
12
mammary gland epithelial cell
12
muscle of trunk
12
retinal pigment epithelial cell
12
skeletal muscle satellite cell
11
aorta
11
chorionic villus
11
erythroblast
11
fibroblast of dermis
11
frontal cortex
11
keratinocyte
11
skeletal muscle myoblast
11
subcutaneous adipose tissue
11
testis
10
H9
10
Peyer's patch
10
foreskin fibroblast
10
left cardiac atrium
10
omental fat pad
10
pancreatic stellate cell
10
skeletal muscle tissue
9
ascending aorta
9
kidney tubule cell
9
layer of hippocampus
9
osteoblast
9
skin fibroblast
9
substantia nigra
9
upper lobe of left lung
8
Ammon's horn
8
SK-N-SH
8
colon epithelial cell
8
immortal human breast epithelial cell line cell
8
lymphocyte
8
naive T cell
8
pituitary stalk
8
progenitor cell of endocrine pancreas
8
putamen
8
skeletal muscle fiber
8
temporal lobe
8
thoracic aorta
8
trophoblast
7
CD4-positive, alpha-beta T cell
7
NAMALWA cell
7
SK-N-DZ
7
breast epithelium
7
cardiac muscle cell
7
cerebellum
7
chorion membrane
7
cingulate gyrus
7
endometrium adenocarcinoma
7
esophagus
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
glomerular endothelial cell
7
hepatic stellate cell
7
limb
7
lymphoblastoid cell line
7
memory B cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
6
22Rv1
6
Brodmann (1909) area 46
6
CD4-positive helper T cell
6
GM19240
6
IMR-90
6
KARPAS-422 cell
6
LNCaP clone FGC
6
SGBS preadipocytes
6
T47D
6
angular gyrus
6
colonic mucosa
6
glomerular visceral epithelial cell
6
induced pluripotent stem cell
6
kidney glomerular epithelial cell
6
left renal cortex interstitium
6
left renal pelvis
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neurosphere
6
right renal pelvis
6
tongue
6
type I muscle cell
5
cardiac fibroblast
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
BE(2)-C
5
BJ cell
5
CD14-positive, CD16-negative classical monocyte
5
Caco-2 cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
Organ
3
brain
Life stage
2
adult
Date released
1
February, 2020
February, 2021
1
January, 2020
1
January, 2022
Software used
1
gtex_eqtl:V8
1
qTLtools
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
month_released!
February, 2021
annotation_type!
Fine-mapped variants
Showing 3 of 3 results
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Download
FileSet
DSR129ZOZ
released
Annotation file set
: brain amygdala eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR303ZTJ
released
Annotation file set
: eQTL of amygdala for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR737OYG
released
Annotation file set
: Gene expression summary of TPM of brain amygdala from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP