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Citing CMDGA
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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
29
fibroblast
27
adipose tissue
22
adipocyte
22
pericyte cell
15
mesenchymal stem cell
14
fibroblast of cardiac tissue
13
fibroblast of lung
13
omental fat pad
13
subcutaneous adipose tissue
11
fibroblast of dermis
10
foreskin fibroblast
10
osteoblast
10
pancreatic stellate cell
10
skin fibroblast
7
hepatic stellate cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
chondrocyte
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
4
GM23248
4
cartilage tissue
4
fibroblast of peridontal ligament
4
fibroblast of the aortic adventitia
4
fibroblast of the conjunctiva
3
HT1080
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
brain pericyte
3
fibroblast of gingiva
3
pancreatic quiescent stellate cell
3
stromal cell of bone marrow
2
articular chondrocyte
2
cardiac fibroblast
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
mesangial cell
2
stromal cell
2
visceral abdominal adipose tissue
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
adult endothelial progenitor cell
1
beige adipocyte
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of arm
1
kidney interstitial fibroblast
1
preadipocyte
1
pulmonary interstitial fibroblast
1
quiescent pancreatic stellate cell
1
subcutaneous abdominal adipose tissue
1
white adipose cell
1
white adipose tissue
Organ
1
connective tissue
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
February, 2021
February, 2020
Showing 1 of 1 results
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Download
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP