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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
1
eQTL
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
5
hepatocyte
4
endothelial cell of hepatic sinusoid
3
pancreatic ductal cell
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
adipocyte
2
adipose-derived stem cell
2
central memory CD8-positive, alpha-beta T cell
2
differentiating adipose-derived stem cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell
2
gamma-delta T cell
2
islet of Langerhans
2
mature natural killer cell
2
memory B cell
2
memory T cell
2
memory regulatory T cell
2
monocyte
2
naive B cell
2
naive regulatory T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
pancreatic acinar cell
2
pancreatic stellate cell
2
regulatory T cell
2
skeletal muscle fiber
1
CD4-positive helper T cell
1
Schwann cell
1
endothelial cell of umbilical vein
1
glial cell
1
immature natural killer cell
1
left renal cortex interstitium
1
leukocyte
1
medulla oblongata
1
mesenchymal stem cell
1
midbrain
1
myeloid dendritic cell
1
natural killer cell
1
neural cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic polypeptide-secreting cell
1
pigmented layer of retina
1
plasma cell
1
plasmacytoid dendritic cell
1
preadipocyte
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
smooth muscle cell
1
tissue-resident macrophage
1
type B pancreatic cell
1
type I muscle cell
1
type II muscle cell
Organ
2
pancreas
Life stage
2
adult
Date released
2
May, 2020
1
June, 2020
1
May, 2021
1
November, 2019
1
November, 2021
1
September, 2022
0
February, 2024
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
month_released!
February, 2021
Showing 2 of 2 results
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Download
FileSet
DSR941LPG
released
Annotation file set
: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 5 T2D samples with most significant peak selected.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR610XQN
released
Annotation file set
: Islet of Langerhans accessible chromatin annotation of overlapping ATAC-seq sites from 38 non-diabetic samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP