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Schema
Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
128
monocyte
67
heart
64
stomach
62
HeLa-S3
57
A549
55
brain
55
kidney
52
H1-hESC
51
lung
49
muscle of arm
49
small intestine
48
adrenal gland
45
placenta
44
CD8-positive, alpha-beta T cell
44
muscle of leg
44
neural progenitor cell
41
large intestine
40
common myeloid progenitor, CD34-positive
40
liver
39
left lung
39
muscle of back
38
K562
37
B cell
37
thymus
35
islet of Langerhans
34
retina
34
right lung
32
endothelial cell
32
hematopoietic multipotent progenitor cell
31
right kidney
29
hepatocyte
29
renal pelvis
28
renal cortex interstitium
27
CD14-positive monocyte
27
CD4-positive, alpha-beta memory T cell
27
left kidney
27
macrophage
26
adipose tissue
26
spinal cord
25
heart left ventricle
24
regulatory T cell
24
spleen
22
fibroblast
22
pericyte cell
22
smooth muscle cell
21
CD8-positive, alpha-beta memory T cell
21
T cell
21
adipocyte
20
EndoC_BH1
20
T-helper 1 cell
20
pancreatic ductal cell
20
pigmented layer of retina
20
tibial nerve
19
HFFc6
19
T-helper 17 cell
19
body of pancreas
18
trophoblast cell
17
caudate nucleus
17
coronary artery
17
mononuclear cell
17
psoas muscle
17
sigmoid colon
16
endothelial cell of hepatic sinusoid
16
natural killer cell
16
ovary
16
pancreatic beta cell
16
right atrium auricular region
15
T-helper 2 cell
15
astrocyte
15
heart right ventricle
15
mesenchymal stem cell
15
pancreas
15
thyroid gland
15
tibial artery
14
frontal cortex
14
pancreatic acinar cell
14
pancreatic alpha cell
14
pancreatic delta cell
13
GM12878
13
HepG2
13
endothelial cell of umbilical vein
13
excitatory neuron
13
fibroblast of cardiac tissue
13
fibroblast of lung
13
gastrocnemius medialis
13
neutrophil
13
omental fat pad
13
subcutaneous adipose tissue
13
substantia nigra
13
transverse colon
12
ascending aorta
12
cerebellum
12
embryonic stem cell
12
endocrine pancreas
12
foreskin keratinocyte
12
muscle of trunk
12
retinal pigment epithelial cell
12
skeletal muscle satellite cell
11
Ammon's horn
11
aorta
11
chorionic villus
11
erythroblast
11
fibroblast of dermis
11
testis
10
H9
10
Peyer's patch
10
foreskin fibroblast
10
keratinocyte
10
pancreatic stellate cell
10
putamen
10
skeletal muscle myoblast
10
skeletal muscle tissue
9
kidney tubule cell
9
layer of hippocampus
9
left cardiac atrium
9
osteoblast
9
skin fibroblast
9
upper lobe of left lung
8
SK-N-SH
8
breast epithelium
8
colon epithelial cell
8
immortal human breast epithelial cell line cell
8
lymphocyte
8
naive T cell
8
pituitary stalk
8
progenitor cell of endocrine pancreas
8
temporal lobe
8
trophoblast
7
CD4-positive, alpha-beta T cell
7
NAMALWA cell
7
SK-N-DZ
7
chorion membrane
7
cingulate gyrus
7
endometrium adenocarcinoma
7
esophagus
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
limb
7
lymphoblastoid cell line
7
memory B cell
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
thoracic aorta
6
22Rv1
6
Brodmann (1909) area 46
6
CD4-positive helper T cell
6
GM19240
6
IMR-90
6
KARPAS-422 cell
6
LNCaP clone FGC
6
SGBS preadipocytes
6
amygdala
6
angular gyrus
6
anterior cingulate cortex
6
bronchial epithelial cell
6
colonic mucosa
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
induced pluripotent stem cell
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neurosphere
6
right lobe of liver
6
skeletal muscle fiber
6
tongue
6
type I muscle cell
5
AG04449 cell
5
AG04450 cell
5
AG09309 cell
5
AG09319 cell
5
AG10803 cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
BE(2)-C
5
BJ cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Caco-2 cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
February, 2021
organ_slims!
mammary gland
annotation_type!
variant allelic effects
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP