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Citing CMDGA
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Annotation type
7
target gene predictions
5
candidate regulatory elements
5
chromatin state
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
1
H1-hESC
1
H4
1
H7-hESC
1
HUES6
1
HUES8
1
embryonic facial prominence
1
hESC H9
1
placental hematopoietic stem cell
1
primordial germ cell
1
trophoblast
1
trophoblast cell
1
trophoblast giant cell
Organ
2
embryo
2
extraembryonic component
Date released
1
June, 2020
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
month_released!
February, 2021
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Download
FileSet
DSR806IKQ
released
Annotation file set
: Accessible chromatin annotation of Fetal Syncitiotrophoblast,Cytotrophoblast,Trophoblast Giant from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR171SFZ
released
Annotation file set
: Accessible chromatin annotation for Placenta Trophoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP