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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
18
MCF-7
13
mammary gland epithelial cell
7
luminal epithelial cell of mammary gland
6
T47D
6
myoepithelial cell of mammary gland
5
fibroblast of mammary gland
4
mammary epithelial cell
Organ
4
epithelium
4
mammary gland
Date released
February, 2021
1
August, 2017
1
June, 2020
1
May, 2021
1
October, 2022
Software used
2
chromhmm
1
abc
1
macs
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
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Download
FileSet
DSR707PUV
released
Annotation file set
: Binding sites annotation for mammary epithelial cell (HMEC) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR379EHB
released
Annotation file set
: enhancer-gene predicton of mammary_epithelial_cell-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR478XSH
released
Annotation file set
: Accessible chromatin annotation for Breast HMEC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR538274
released
Annotation file set
: ChromHMM 13-state model for HMEC
Lab:
Stephen Parker, UMich
Project:
AMP