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Schema
Citing CMDGA
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Annotation type
4
variant allelic effects
3
Fine-mapped variants
3
accessible chromatin
3
chromatin state
2
candidate regulatory elements
2
eQTL
2
target gene predictions
1
gene expression
Annotation Category
4
Genetic variant effects
Annotation type Category
2
snATAC-seq
1
ATAC-seq
1
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
2
primary cell
2
tissue
Biosample term
2
cardiac fibroblast
2
coronary artery
2
tibial artery
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
ascending aorta
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
thoracic aorta
Organ
4
vasculature
2
artery
2
blood vessel
2
limb
Date released
2
February, 2024
2
May, 2020
Software used
4
deltasvm
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
month_released!
February, 2021
Showing 4 of 4 results
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FileSet
DSR963XVP
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR265TNH
released
Annotation file set
: Variant allelic effects annotation of Vascular smooth muscle cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR238UZR
released
Annotation file set
: Genetic variants with deltaSVM predictions in tibial artery ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR283WPA
released
Annotation file set
: Genetic variants with deltaSVM predictions in artery tibial DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP